RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 BMP2P12643 396 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SYN1P17600 705 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SLC6A8P48029 635 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SNRPD2P62316 118 aaKnown RBP10.06□□□□□ -0.8
CLIP1-209ENST00000537178 RPL23AP62750 156 aaKnown RBP10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SHC2P98077 582 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 LSAMPQ13449 338 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PSAPL1Q6NUJ1 521 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SLC22A25Q6T423 547 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 KIAA0907Q7Z7F0 614 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-209ENST00000537178 OR4N5Q8IXE1 308 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 CDRT4Q8N9R6 151 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 HERPUD2Q9BSE4 406 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 NUMBLQ9Y6R0 609 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 ARGFXA6NJG6 315 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 GPR137BO60478 399 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SPDEFO95238 335 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 GJB5O95377 273 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 IL1RNP18510 177 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 GCH1P30793 250 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 CLVS2Q5SYC1 327 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 FAM69AQ5T7M9 428 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 ABHD17BQ5VST6 288 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 LANCL3Q6ZV70 420 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 C16orf78Q8WTQ4 265 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PEX11GQ96HA9 241 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 USB1Q9BQ65 265 aaKnown RBP10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SLA2Q9H6Q3 261 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SERTAD4Q9NUC0 356 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 ANKMY1Q9P2S6 941 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PCYT1BQ9Y5K3 369 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-209ENST00000537178 DOCK5Q9H7D0 1870 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 LOC102723532A0A0G2JNH3 316 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 A0A1W2PS29 197 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 NPC1O15118 1278 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 GMDSO60547 372 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 CLN5O75503 358 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 SEC14L2O76054 403 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 EPHA1P21709 976 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 DYRK1AQ13627 763 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 BATFQ16520 125 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 DCST2Q5T1A1 773 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PRAMEF8Q5VWM4 474 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PRAMEF7Q5VXH5 474 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 ENPP6Q6UWR7 440 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 USP53Q70EK8 1073 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF551Q7Z340 670 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-209ENST00000537178 AMIGO3Q86WK7 504 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 TMEM151BQ8IW70 566 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF610Q8N9Z0 462 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PRRT1Q99946 306 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 CWH43Q9H720 699 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PRMT8Q9NR22 394 aaPredicted RBP10.06□□□□□ -0.8
CLIP1-209ENST00000537178 PLEKHJ1Q9NW61 149 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 DNAJC15Q9Y5T4 150 aa10.06□□□□□ -0.8
CLIP1-209ENST00000537178 A0A0U1RQK1 487 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 TPT1P13693 172 aaKnown RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 TAS2R30P59541 319 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 GALNT1Q10472 559 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 MEF2DQ14814 521 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 SSX2Q16385 188 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 AGAP7PQ5VUJ5 663 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 AGAP6Q5VW22 663 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 COMMD6Q7Z4G1 85 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 CPOQ8IVL8 374 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 OR52B6Q8NGF0 335 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 OR4K15Q8NH41 348 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 MYLIPQ8WY64 445 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 SAMD8Q96LT4 415 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 AGAP4Q96P64 663 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 TCEAL7Q9BRU2 100 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 ALG8Q9BVK2 526 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF160Q9HCG1 818 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 RPS10P5Q9NQ39 176 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 EBF1Q9UH73 591 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 RIMS3Q9UJD0 308 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 SLC6A5Q9Y345 797 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 FEZF1A0PJY2 475 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 SCAF4O95104 1147 aaKnown RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 MMP2P08253 660 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 UBL4AP11441 157 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 GM2AP17900 193 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 DSC1Q08554 894 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 SLC35F2Q8IXU6 374 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 CLECL1Q8IZS7 167 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 ABHD11Q8NFV4 315 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 OR7G1Q8NGA0 311 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 SORCS1Q8WY21 1168 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 FOXJ1Q92949 421 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 RAB39BQ96DA2 213 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 MSI2Q96DH6 328 aaKnown RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 FAM71F1Q96KD3 344 aaPredicted RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 FBRSQ9HAH7 460 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 DNAJB11Q9UBS4 358 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 GPR52Q9Y2T5 361 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 DCDC2BA2VCK2 349 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 IGLON5A6NGN9 336 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 UBFD1O14562 309 aaKnown RBP10.05□□□□□ -0.8
CLIP1-209ENST00000537178 DVL2O14641 736 aa10.05□□□□□ -0.8
CLIP1-209ENST00000537178 AKAIN1P0CW23 69 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms