RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 KLHL4Q9C0H6 718 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 EMC9Q9Y3B6 208 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PTGDR2Q9Y5Y4 395 aa17.67■□□□□ 0.42
TNFRSF1B-204ENST00000536782 RAI1Q7Z5J4 1906 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 A0A087WZY1 265 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 FAM171A2A8MVW0 826 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 NDUFB5O43674 189 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PLGP00747 810 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 MAP3K8P41279 467 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 MANFP55145 182 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 EXOC3L2Q2M3D2 409 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 SZRD1Q7Z422 152 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GALNT10Q86SR1 603 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 WDR75Q8IWA0 830 aaKnown RBP17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 NUP43Q8NFH3 380 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 OR4C3Q8NH37 302 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 SLC9A6Q92581 669 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 CAVIN3Q969G5 261 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 MARK4Q96L34 752 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 REEP4Q9H6H4 257 aa17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PAQR5Q9NXK6 330 aaPredicted RBP17.66■□□□□ 0.42
TNFRSF1B-204ENST00000536782 COPEO14579 308 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 AKAP10O43572 662 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 TBX19O60806 448 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 OXSR1O95747 527 aaPredicted RBP17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 NGFRP08138 427 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ZNF385BQ569K4 471 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 LIPMQ5VYY2 423 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 ANKRD34AQ69YU3 496 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 C20orf204Q6ZNR8 217 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 Q6ZSR9 355 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GTPBP8Q8N3Z3 284 aaPredicted RBP17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 OR6Y1Q8NGX8 325 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 OR6K3Q8NGY3 331 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 OR10D3Q8NH80 312 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GMPPAQ96IJ6 420 aaPredicted RBP17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 FCRL1Q96LA6 429 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 MS4A4EQ96PG1 132 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 TSSK3Q96PN8 268 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 HS3ST6Q96QI5 342 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 C12orf65Q9H3J6 166 aaKnown RBP17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 PLSCR4Q9NRQ2 329 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 SH3BP4Q9P0V3 963 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 NTMQ9P121 344 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 MCTS1Q9ULC4 181 aaKnown RBP17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 FIS1Q9Y3D6 152 aa17.65■□□□□ 0.42
TNFRSF1B-204ENST00000536782 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 AZIN1O14977 448 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SHBGP04278 402 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 HEXAP06865 529 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ACP2P11117 423 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 NEFHP12036 1026 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PPP3CBP16298 524 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SDC1P18827 310 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 FRKP42685 505 aaPredicted RBP17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SLC6A8P48029 635 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ZNF41P51814 821 aaPredicted RBP17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CTBP2P56545 445 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 FIGNL1Q6PIW4 674 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PRSS57Q6UWY2 283 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 C22orf34Q6ZV56 151 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 GSPT2Q8IYD1 628 aaKnown RBP17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 GATSQ8NAP1 163 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SLC16A11Q8NCK7 471 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 OR2T11Q8NH01 316 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 FBXO30Q8TB52 745 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 FAM110BQ8TC76 370 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ZBTB8AQ96BR9 441 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 GIMAP5Q96F15 307 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PPCSQ9HAB8 311 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 FANCFQ9NPI8 374 aa17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ACSS1Q9NUB1 689 aaPredicted RBP17.64■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SS18L1O75177 396 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 KCNK2O95069 426 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SYNGR4O95473 234 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CHEK2O96017 543 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 HPGDP15428 266 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 IL11P20809 199 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 LOXP28300 417 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 LCN1P31025 176 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 RAC1P63000 192 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 RPL38P63173 70 aaKnown RBP17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 SLC18A2Q05940 514 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 PDE7AQ13946 482 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CTU2Q2VPK5 515 aaKnown RBP17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 RFTN2Q52LD8 501 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CPTPQ5TA50 214 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 MFSD12Q6NUT3 480 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ZCCHC12Q6PEW1 402 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 RNF165Q6ZSG1 346 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 TDRPQ86YL5 185 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 CLHC1Q8NHS4 586 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ACTRT2Q8TDY3 377 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 UBLCP1Q8WVY7 318 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 ADGRG7Q96K78 797 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 COX4I2Q96KJ9 171 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 Q96MF0 132 aa17.63■□□□□ 0.41
TNFRSF1B-204ENST00000536782 UBQLN4Q9NRR5 601 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms