RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MCEEQ96PE7 176 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 PCDHB18PQ96TA0 734 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 TREX2Q9BQ50 279 aaPredicted RBP4.74□□□□□ -1.65
CLIP1-207ENST00000536634 TIMM29Q9BSF4 260 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 BARHL1Q9BZE3 327 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 CXXC4Q9H2H0 198 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 HRH4Q9H3N8 390 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 DHX35Q9H5Z1 703 aaKnown RBP4.74□□□□□ -1.65
CLIP1-207ENST00000536634 NT5MQ9NPB1 228 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 HRASLS2Q9NWW9 162 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 TAS2R14Q9NYV8 317 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 EXO1Q9UQ84 846 aaKnown RBP4.74□□□□□ -1.65
CLIP1-207ENST00000536634 CPAMD8Q8IZJ3 1885 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 HIVEP2P31629 2446 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 BICDL2A1A5D9 508 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 OR6C74A6NCV1 312 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 SIGLEC16A6NMB1 481 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 E7EQ34 232 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 F8VZ95 297 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 H3BMH7 237 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 KMOO15229 486 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 KLHL41O60662 606 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 SLC25A14O95258 325 aaPredicted RBP4.73□□□□□ -1.65
CLIP1-207ENST00000536634 F10P00742 488 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 HSP90AA1P07900 732 aaKnown RBP4.73□□□□□ -1.65
CLIP1-207ENST00000536634 PVRP15151 417 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 GNB3P16520 340 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 HSPA9P38646 679 aaKnown RBP4.73□□□□□ -1.65
CLIP1-207ENST00000536634 AIF1P55008 147 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 PMP22Q01453 160 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 DEFB110Q30KQ9 67 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 FAM182AQ5T1J6 154 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 GCNT6Q5T4J0 391 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 AGAP7PQ5VUJ5 663 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 RPUSD3Q6P087 351 aaKnown RBP4.73□□□□□ -1.65
CLIP1-207ENST00000536634 OOSP2Q86WS3 158 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 PLD3Q8IV08 490 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 GPR26Q8NDV2 337 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 LPCAT1Q8NF37 534 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 DAZLQ92904 295 aaKnown RBP4.73□□□□□ -1.65
CLIP1-207ENST00000536634 GLYATL1Q969I3 302 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 LRR1Q96L50 414 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 AGAP4Q96P64 663 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 LYSMD1Q96S90 227 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 RHNO1Q9BSD3 238 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 SNRNP25Q9BV90 132 aaKnown RBP4.73□□□□□ -1.65
CLIP1-207ENST00000536634 SPATA16Q9BXB7 569 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 TDRD1Q9BXT4 1180 aaKnown RBP4.73□□□□□ -1.65
CLIP1-207ENST00000536634 KRTAP4-4Q9BYR3 166 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 GFRA4Q9GZZ7 299 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 PPIL3Q9H2H8 161 aaKnown RBP4.73□□□□□ -1.65
CLIP1-207ENST00000536634 FANCEQ9HB96 536 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 NPAP1Q9NZP6 1156 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 ADAM22Q9P0K1 906 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 SEC14L3Q9UDX4 400 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 PCSK1NQ9UHG2 260 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 AMACRQ9UHK6 382 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 POMT2Q9UKY4 750 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 PSMD13Q9UNM6 376 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 KCNK7Q9Y2U2 307 aa4.73□□□□□ -1.65
CLIP1-207ENST00000536634 DNAJC13O75165 2243 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 PRSS51A0A1B0GVH4 220 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 OR6C76A6NM76 312 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 AGAP14A8MT82 685 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 MAGEB17A8MXT2 336 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 GPR89AB7ZAQ6 455 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 TO15178 435 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 VEGFDO43915 354 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 SLC19A2O60779 497 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 GFPT2O94808 682 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 CDK14O94921 469 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 IGHEP01854 428 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 SLC4A1P02730 911 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 PTMAP06454 111 aaKnown RBP4.72□□□□□ -1.65
CLIP1-207ENST00000536634 PIRTP0C851 137 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 GPR89BP0CG08 455 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 UCHL3P15374 230 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 CDH3P22223 829 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 IDSP22304 550 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 PSMB10P40306 273 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 TNFSF10P50591 281 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 MFAP4P55083 255 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 SNRPEP62304 92 aaKnown RBP4.72□□□□□ -1.65
CLIP1-207ENST00000536634 CDR2Q01850 454 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 NFE2L1Q14494 772 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 CEBPEQ15744 281 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 FAM98BQ52LJ0 330 aaKnown RBP4.72□□□□□ -1.65
CLIP1-207ENST00000536634 MARC1Q5VT66 337 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 DNAJC24Q6P3W2 148 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 CDHR3Q6ZTQ4 885 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 KRTAP7-1Q8IUC3 87 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 TRAPPC5Q8IUR0 188 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 GPALPP1Q8IXQ4 340 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 ATPAF2Q8N5M1 289 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 TEX26Q8N6G2 289 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 NAT14Q8WUY8 206 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 PTERQ96BW5 349 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 ZNF653Q96CK0 615 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 CCDC34Q96HJ3 373 aa4.72□□□□□ -1.65
CLIP1-207ENST00000536634 FOXC2Q99958 501 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms