RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TNFSF13O75888 250 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 C6orf47O95873 294 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 HMGN2P05204 90 aaKnown RBP12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 HPGDP15428 266 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 SERPINB4P48594 390 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 POU6F2P78424 691 aaPredicted RBP12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 ZNF844Q08AG5 666 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 TP53BP2Q13625 1128 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 DAZAP2Q15038 168 aaPredicted RBP12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 MLC1Q15049 377 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 PON3Q15166 354 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 SPDYE7PQ495Y7 208 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 OR2A2Q6IF42 318 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 VWA1Q6PCB0 445 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 SPNS3Q6ZMD2 512 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 OR6Y1Q8NGX8 325 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 FNDC9Q8TBE3 224 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 FAM110BQ8TC76 370 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 CDS1Q92903 461 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 SH3YL1Q96HL8 342 aaPredicted RBP12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 TMEM109Q9BVC6 243 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 PARD6BQ9BYG5 372 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 CENPHQ9H3R5 247 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 ZNF395Q9H8N7 513 aaPredicted RBP12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 ATAD3AQ9NVI7 634 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 GIN1Q9NXP7 522 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 ST6GALNAC2Q9UJ37 374 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 PLEKHA6Q9Y2H5 1048 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 F8P00451 2351 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 SPG11Q96JI7 2443 aa12.88□□□□□ -0.35
RTN3P1-201ENST00000536295 ANKHD1Q8IWZ3 2542 aaKnown RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 A8MXE2 369 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 SCDO00767 359 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 CFLARO15519 480 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 TNFRSF21O75509 655 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 OPN1LWP04000 364 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 G6PDP11413 515 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 CD1EP15812 388 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 TBXA2RP21731 343 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 CCT3P49368 545 aaKnown RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 RNF144AP50876 292 aaPredicted RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 RPS3AP61247 264 aaKnown RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 EEF1A1P68104 462 aaKnown RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 POU4F3Q15319 338 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 CHI3L2Q15782 390 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 PDCD2Q16342 344 aaPredicted RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 SGCBQ16585 318 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 GLYR1Q49A26 553 aaPredicted RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 EEF1A1P5Q5VTE0 462 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 ZCCHC12Q6PEW1 402 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 MREGQ8N565 214 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 OR5P2Q8WZ92 322 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 STARD4Q96DR4 205 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 PRPF18Q99633 342 aaKnown RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 NPAS1Q99742 590 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 BTBD2Q9BX70 525 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 OPN3Q9H1Y3 402 aaPredicted RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 CXorf36Q9H7Y0 433 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 UBQLN4Q9NRR5 601 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 EIF3LQ9Y262 564 aaKnown RBP12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 AP4B1Q9Y6B7 739 aa12.87□□□□□ -0.35
RTN3P1-201ENST00000536295 NPIPA5A0A0B4J1W7 369 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 SH3D21A4FU49 640 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 NPIPA7E9PJI5 369 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 EIF1AYO14602 144 aaKnown RBP12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 NGFRP08138 427 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 NPIPA8P0DM63 369 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 PRPS1L1P21108 318 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 ATP6V1C1P21283 382 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 DNASE1P24855 282 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 SOAT1P35610 550 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 EIF1AXP47813 144 aaKnown RBP12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 ZNF41P51814 821 aaPredicted RBP12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 FAM27E3Q08E93 113 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 TMEM44Q2T9K0 475 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 PGS1Q32NB8 556 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 LSM12Q3MHD2 195 aaKnown RBP12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 BTLAQ7Z6A9 289 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 ZNF781Q8N8C0 355 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 OR5AK3PQ8NH89 298 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 NINJ1Q92982 152 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 COQ8BQ96D53 544 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 PGM2Q96G03 612 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 STACQ99469 402 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 KLHDC3Q9BQ90 382 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 PIGUQ9H490 435 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 FAF1Q9UNN5 650 aaPredicted RBP12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 MED12LQ86YW9 2145 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 PCNX3Q9H6A9 2034 aa12.86□□□□□ -0.35
RTN3P1-201ENST00000536295 MSTNO14793 375 aa12.85□□□□□ -0.35
RTN3P1-201ENST00000536295 SERPINE1P05121 402 aa12.85□□□□□ -0.35
RTN3P1-201ENST00000536295 CRHP06850 196 aa12.85□□□□□ -0.35
RTN3P1-201ENST00000536295 ZNF17P17021 662 aa12.85□□□□□ -0.35
RTN3P1-201ENST00000536295 KIR2DL2P43627 348 aaPredicted RBP12.85□□□□□ -0.35
RTN3P1-201ENST00000536295 ABCE1P61221 599 aaKnown RBP12.85□□□□□ -0.35
RTN3P1-201ENST00000536295 MAD2L1Q13257 205 aaPredicted RBP12.85□□□□□ -0.35
RTN3P1-201ENST00000536295 CD226Q15762 336 aa12.85□□□□□ -0.35
RTN3P1-201ENST00000536295 EXOSC6Q5RKV6 272 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms