RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 COX18Q8N8Q8 333 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 FNDC9Q8TBE3 224 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 FIG4Q92562 907 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 PIK3R3Q92569 461 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 CAVIN3Q969G5 261 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 ZBTB8AQ96BR9 441 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 PPP3R2Q96LZ3 170 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 GATA5Q9BWX5 397 aaPredicted RBP11.82□□□□□ -0.52
RTN3-207ENST00000536011 PRRG4Q9BZD6 226 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 UBQLN4Q9NRR5 601 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 ATAD3AQ9NVI7 634 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 MCTS1Q9ULC4 181 aaKnown RBP11.82□□□□□ -0.52
RTN3-207ENST00000536011 PROCRQ9UNN8 238 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 EMC9Q9Y3B6 208 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 DNAJC15Q9Y5T4 150 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 PTGDR2Q9Y5Y4 395 aa11.82□□□□□ -0.52
RTN3-207ENST00000536011 TLDC2A0PJX2 215 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 C7orf72A4D263 438 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 C16orf97H3BN30 126 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 EIF1AYO14602 144 aaKnown RBP11.81□□□□□ -0.52
RTN3-207ENST00000536011 CTIFO43310 598 aaKnown RBP11.81□□□□□ -0.52
RTN3-207ENST00000536011 OXSR1O95747 527 aaPredicted RBP11.81□□□□□ -0.52
RTN3-207ENST00000536011 FGF4P08620 206 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 KRT16P08779 473 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 NUDT7P0C024 238 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 TBXA2RP21731 343 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 UGT2B10P36537 528 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 MAP3K8P41279 467 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
RTN3-207ENST00000536011 CLDN15P56746 228 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 CLDN20P56880 219 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 IFFO1Q0D2I5 559 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 MLC1Q15049 377 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 TMEM44Q2T9K0 475 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 KRTAP21-3Q3LHN1 58 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 RFTN2Q52LD8 501 aaPredicted RBP11.81□□□□□ -0.52
RTN3-207ENST00000536011 PPP4R4Q6NUP7 873 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 FAM214BQ7L5A3 538 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 BTLAQ7Z6A9 289 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 GTPBP8Q8N3Z3 284 aaPredicted RBP11.81□□□□□ -0.52
RTN3-207ENST00000536011 ZNF527Q8NB42 609 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 OR5M1Q8NGP8 315 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 OR2T11Q8NH01 316 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 CLHC1Q8NHS4 586 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 ACTRT2Q8TDY3 377 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 TWIST2Q8WVJ9 160 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 JADE3Q92613 823 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 RTN4RQ9BZR6 473 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 OPN3Q9H1Y3 402 aaPredicted RBP11.81□□□□□ -0.52
RTN3-207ENST00000536011 C12orf65Q9H3J6 166 aaKnown RBP11.81□□□□□ -0.52
RTN3-207ENST00000536011 VDAC3Q9Y277 283 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 TRAF6Q9Y4K3 522 aa11.81□□□□□ -0.52
RTN3-207ENST00000536011 A0A1W2PQD3 144 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 H0YC42 278 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 SCAMP2O15127 329 aaKnown RBP11.8□□□□□ -0.52
RTN3-207ENST00000536011 ARHGEF9O43307 516 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 GMFGO60234 142 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 LYPLA1O75608 230 aaPredicted RBP11.8□□□□□ -0.52
RTN3-207ENST00000536011 KCNK2O95069 426 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 SYNGR4O95473 234 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 IGKV1D-16P01601 117 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 BCKDHAP12694 445 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 PPP3CBP16298 524 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 ATP6V1C1P21283 382 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 EIF1AXP47813 144 aaKnown RBP11.8□□□□□ -0.52
RTN3-207ENST00000536011 SUCLG1P53597 346 aaKnown RBP11.8□□□□□ -0.52
RTN3-207ENST00000536011 TPD52P55327 224 aaPredicted RBP11.8□□□□□ -0.52
RTN3-207ENST00000536011 CTBP2P56545 445 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 ADAM8P78325 824 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 FAM27E3Q08E93 113 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 ATP6AP1LQ52LC2 224 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 ZNF385BQ569K4 471 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 PDSS1Q5T2R2 415 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 STK32CQ86UX6 486 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 EXOC3L1Q86VI1 746 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 BANPQ8N9N5 519 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 SLC16A11Q8NCK7 471 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 OR6K3Q8NGY3 331 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 FBXO30Q8TB52 745 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 PIGTQ969N2 578 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 CHMP6Q96FZ7 201 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 GMPPAQ96IJ6 420 aaPredicted RBP11.8□□□□□ -0.52
RTN3-207ENST00000536011 STACQ99469 402 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 PRPF18Q99633 342 aaKnown RBP11.8□□□□□ -0.52
RTN3-207ENST00000536011 BTBD2Q9BX70 525 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 TUBB1Q9H4B7 451 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 DUSP22Q9NRW4 184 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 GLRX2Q9NS18 164 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 ZCCHC3Q9NUD5 404 aaKnown RBP11.8□□□□□ -0.52
RTN3-207ENST00000536011 KLHL28Q9NXS3 571 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 BAIAP2L1Q9UHR4 511 aa11.8□□□□□ -0.52
RTN3-207ENST00000536011 ACANP16112 2415 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 A0A1W2PRB8 838 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 H3BNH8 94 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 PIP5K1BO14986 540 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 DIAPH2O60879 1101 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 CHRNGP07510 517 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 NUDT17P0C025 328 aa11.79□□□□□ -0.52
RTN3-207ENST00000536011 ACP2P11117 423 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms