RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 HCN2Q9UL51 889 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 OR1A2Q9Y585 309 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 PLXND1Q9Y4D7 1925 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 CDH23Q9H251 3354 aa16.79■□□□□ 0.28
RAB40C-203ENST00000535977 TPST2O60704 377 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 SEMA7AO75326 666 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 CHRM5P08912 532 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-203ENST00000535977 TMEM107Q6UX40 140 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 GJD3Q8N144 294 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 MS4A15Q8N5U1 240 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 SLC7A13Q8TCU3 470 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 IL4I1Q96RQ9 567 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 POLDIP3Q9BY77 421 aaKnown RBP16.78■□□□□ 0.28
RAB40C-203ENST00000535977 REG4Q9BYZ8 158 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 GSX2Q9BZM3 304 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 EMC7Q9NPA0 242 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 HEBP2Q9Y5Z4 205 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 IGKV1-8A0A0C4DH67 115 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 HK1P19367 917 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 HIST1H1TP22492 207 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-203ENST00000535977 FCARP24071 287 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 SDC2P34741 201 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 CAV3P56539 151 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 CCDC85BQ15834 202 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-203ENST00000535977 BCL2L15Q5TBC7 163 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 MRM1Q6IN84 353 aaKnown RBP16.78■□□□□ 0.28
RAB40C-203ENST00000535977 YAF2Q8IY57 180 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 PROKR2Q8NFJ6 384 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 TMEM203Q969S6 136 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 WACQ9BTA9 647 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 PINK1Q9BXM7 581 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 BTBD1Q9H0C5 482 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 PCDHB16Q9NRJ7 776 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 IMP3Q9NV31 184 aaKnown RBP16.78■□□□□ 0.28
RAB40C-203ENST00000535977 PRELID3BQ9Y3B1 194 aa16.78■□□□□ 0.28
RAB40C-203ENST00000535977 KLF2Q9Y5W3 355 aaPredicted RBP16.78■□□□□ 0.28
RAB40C-203ENST00000535977 IRGMA1A4Y4 181 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 HBQ1P09105 142 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 F8A1P23610 371 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 INPP1P49441 399 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 PUDPQ08623 228 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 C1DQ13901 141 aaKnown RBP16.77■□□□□ 0.28
RAB40C-203ENST00000535977 IL18Q14116 193 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 DUSP6Q16828 381 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 TANGO2Q6ICL3 276 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 VITQ6UXI7 678 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 SZRD1Q7Z422 152 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 OR2L5Q8NG80 312 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 OR4D11Q8NGI4 311 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 MS4A6EQ96DS6 147 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 PRRC1Q96M27 445 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 KCNJ15Q99712 375 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 NRTNQ99748 197 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 C1QTNF2Q9BXJ5 285 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 SDHAF2Q9NX18 166 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 CALML5Q9NZT1 146 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 ENTPD4Q9Y227 616 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 SLC17A4Q9Y2C5 497 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 ASB4Q9Y574 426 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 ZNF254O75437 659 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 IFNGR2P38484 337 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 BCL6P41182 706 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 PRR5P85299 388 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 HSF2Q03933 536 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 TGM3Q08188 693 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 ZNF57Q68EA5 555 aaPredicted RBP16.77■□□□□ 0.28
RAB40C-203ENST00000535977 ABHD17CQ6PCB6 329 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 PODNL1Q6PEZ8 512 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 ZNF793Q6ZN11 406 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 SPRED2Q7Z698 418 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 SOSTQ9BQB4 213 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 RSPO3Q9BXY4 272 aaPredicted RBP16.77■□□□□ 0.28
RAB40C-203ENST00000535977 POLR2J2Q9GZM3 115 aaKnown RBP16.77■□□□□ 0.28
RAB40C-203ENST00000535977 SNX11Q9Y5W9 270 aa16.77■□□□□ 0.28
RAB40C-203ENST00000535977 PRAMEF27A3QJZ7 478 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 FAM227AF5H4B4 570 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 SYT5O00445 386 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 PRICKLE3O43900 615 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-203ENST00000535977 PAK4O96013 591 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-203ENST00000535977 RAB3AP20336 220 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 UAP1L1Q3KQV9 507 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 C1orf94Q6P1W5 598 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 RBM45Q8IUH3 476 aaKnown RBP16.76■□□□□ 0.27
RAB40C-203ENST00000535977 AMER3Q8N944 861 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 LDAHQ9H6V9 325 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 PRDM7Q9NQW5 492 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 MAB21L2Q9Y586 359 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 MYO10Q9HD67 2058 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 SLC22A23A1A5C7 686 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 PRR19A6NJB7 356 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 HPGDSO60760 199 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 ANXA3P12429 323 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 CSNK2A2P19784 350 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-203ENST00000535977 ATP5A1P25705 553 aaKnown RBP16.76■□□□□ 0.27
RAB40C-203ENST00000535977 CMPK1P30085 196 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 MPIP34949 423 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 SMSP52788 366 aa16.76■□□□□ 0.27
RAB40C-203ENST00000535977 POLR2GP62487 172 aaKnown RBP eCLIP16.76■□□□□ 0.27
RAB40C-203ENST00000535977 PIN1Q13526 163 aaPredicted RBP16.76■□□□□ 0.27
RAB40C-203ENST00000535977 ENTPD8Q5MY95 495 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms