RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 BHLHE41Q9C0J9 482 aaPredicted RBP14.85□□□□□ -0.03
ATL3-202ENST00000535789 DSN1Q9H410 356 aa14.85□□□□□ -0.03
ATL3-202ENST00000535789 WDR55Q9H6Y2 383 aaPredicted RBP14.85□□□□□ -0.03
ATL3-202ENST00000535789 TAS2R10Q9NYW0 307 aa14.85□□□□□ -0.03
ATL3-202ENST00000535789 MED11Q9P086 117 aa14.85□□□□□ -0.03
ATL3-202ENST00000535789 PPP4R1LQ9P1A2 415 aa14.85□□□□□ -0.03
ATL3-202ENST00000535789 EIF3LQ9Y262 564 aaKnown RBP14.85□□□□□ -0.03
ATL3-202ENST00000535789 RPH3AQ9Y2J0 694 aaPredicted RBP14.85□□□□□ -0.03
ATL3-202ENST00000535789 IGLV3-32A0A0A0MS00 114 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 GOLGA8QA0A0J9YX86 632 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 GOLGA8OA6NCC3 632 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 MBD3L4A6NDZ8 208 aaPredicted RBP14.84□□□□□ -0.03
ATL3-202ENST00000535789 MBD3L3A6NE82 208 aaPredicted RBP14.84□□□□□ -0.03
ATL3-202ENST00000535789 MBD3L5A6NJ08 208 aaPredicted RBP14.84□□□□□ -0.03
ATL3-202ENST00000535789 TTC36A6NLP5 189 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 AHRRA9YTQ3 701 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 GOLGA8NF8WBI6 632 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 ACTL6AO96019 429 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 ZNF708P17019 499 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 DPP4P27487 766 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 PTGER4P35408 488 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 RPL3P39023 403 aaKnown RBP14.84□□□□□ -0.03
ATL3-202ENST00000535789 DLX5P56178 289 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 CLDN15P56746 228 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 PRR5P85299 388 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.84□□□□□ -0.03
ATL3-202ENST00000535789 NSUN5P2Q63ZY6 315 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 C9orf106Q8NAJ2 232 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 OR4C3Q8NH37 302 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 CEP70Q8NHQ1 597 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 MBD3L2Q8NHZ7 208 aaPredicted RBP14.84□□□□□ -0.03
ATL3-202ENST00000535789 ACTRT2Q8TDY3 377 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 TEX37Q96LM6 180 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.84□□□□□ -0.03
ATL3-202ENST00000535789 DKKL1Q9UK85 242 aa14.84□□□□□ -0.03
ATL3-202ENST00000535789 MRPS18CQ9Y3D5 142 aaKnown RBP14.84□□□□□ -0.03
ATL3-202ENST00000535789 NPIPA5A0A0B4J1W7 369 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 SHISA8B8ZZ34 492 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 NPIPA7E9PJI5 369 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 KCNH1O95259 989 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 ANGPTL1O95841 491 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 HOXD4P09016 255 aaPredicted RBP14.83□□□□□ -0.04
ATL3-202ENST00000535789 NPIPA8P0DM63 369 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 CPN1P15169 458 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 KRTAP10-9P60411 292 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 RPS26P62854 115 aaKnown RBP14.83□□□□□ -0.04
ATL3-202ENST00000535789 MAD2L1Q13257 205 aaPredicted RBP14.83□□□□□ -0.04
ATL3-202ENST00000535789 TP53BP2Q13625 1128 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 CD226Q15762 336 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 LSM12Q3MHD2 195 aaKnown RBP14.83□□□□□ -0.04
ATL3-202ENST00000535789 OGFOD2Q6N063 350 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 MEX3BQ6ZN04 569 aaKnown RBP14.83□□□□□ -0.04
ATL3-202ENST00000535789 LACC1Q8IV20 430 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 PM20D2Q8IYS1 436 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 ANKS4BQ8N8V4 417 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 GATSQ8NAP1 163 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 OR4K17Q8NGC6 315 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 OR5D16Q8NGK9 328 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 OR5M1Q8NGP8 315 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 SFXN5Q8TD22 340 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 DUSP19Q8WTR2 217 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 C1GALT1C1Q96EU7 318 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 TRIB1Q96RU8 372 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 SPOCK3Q9BQ16 436 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 CCDC28BQ9BUN5 200 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 C3orf14Q9HBI5 128 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 TCF7L2Q9NQB0 619 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 CLCF1Q9UBD9 225 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 ARL2BPQ9Y2Y0 163 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 SNX8Q9Y5X2 465 aa14.83□□□□□ -0.04
ATL3-202ENST00000535789 CREBBPQ92793 2442 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 CD8B2A6NJW9 211 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 ALG1L2C9J202 215 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 C9JVG2 144 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 H0YC42 278 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 GMFGO60234 142 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 NGFRP08138 427 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 ALOX5P09917 674 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 IL12AP29459 219 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 TIMP3P35625 211 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 CCT3P49368 545 aaKnown RBP14.82□□□□□ -0.04
ATL3-202ENST00000535789 RNF144AP50876 292 aaPredicted RBP14.82□□□□□ -0.04
ATL3-202ENST00000535789 TPD52P55327 224 aaPredicted RBP14.82□□□□□ -0.04
ATL3-202ENST00000535789 DSCR4P56555 118 aaPredicted RBP14.82□□□□□ -0.04
ATL3-202ENST00000535789 TMEM44Q2T9K0 475 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 VPS26BQ4G0F5 336 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 CDC73Q6P1J9 531 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 ZCCHC12Q6PEW1 402 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 OLIG3Q7RTU3 272 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 GDF7Q7Z4P5 450 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 COX18Q8N8Q8 333 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 CCDC197Q8NCU1 140 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 ZPLD1Q8TCW7 415 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 JADE3Q92613 823 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 SFXN2Q96NB2 322 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 STACQ99469 402 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 PIGUQ9H490 435 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 NEUROD4Q9HD90 331 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 KCNJ16Q9NPI9 418 aa14.82□□□□□ -0.04
ATL3-202ENST00000535789 DUSP22Q9NRW4 184 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms