RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 DRD2P14416 443 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 NAGAP17050 411 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 IGFBP2P18065 325 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 M6PRP20645 277 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 SOX18P35713 384 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 ETV4P43268 484 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 EMDP50402 254 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 DCAF7P61962 342 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 CRYZQ08257 329 aaKnown RBP7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 HEPACAMQ14CZ8 416 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 EIPR1Q53HC9 387 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 RIPPLY2Q5TAB7 128 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 FNDC7Q5VTL7 733 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 SLC30A6Q6NXT4 461 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 ANGPTL8Q6UXH0 198 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 NUP54Q7Z3B4 507 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 GPR141Q7Z602 305 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 YRDCQ86U90 279 aaKnown RBP7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 LIX1LQ8IVB5 337 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 FAM9CQ8IZT9 166 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 TRIML2Q8N7C3 387 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 SPERTQ8NA61 448 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 TNIP2Q8NFZ5 429 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 OR1J4Q8NGS1 313 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 ZNF675Q8TD23 568 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 HGDQ93099 445 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 TMBIM1Q969X1 311 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 CMTM5Q96DZ9 223 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 PRPF18Q99633 342 aaKnown RBP7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 TREX2Q9BQ50 279 aaPredicted RBP7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 TUBA1CQ9BQE3 449 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 C1orf50Q9BV19 199 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 OSBPL11Q9BXB4 747 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 SHCBP1LQ9BZQ2 653 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 NDEL1Q9GZM8 345 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 NMUR2Q9GZQ4 415 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 UBQLN3Q9H347 655 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 MCCC2Q9HCC0 563 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 GALNT9Q9HCQ5 603 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 MAPRE3Q9UPY8 281 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 CAMK2AQ9UQM7 478 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 MYRFQ9Y2G1 1151 aa7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 POLR3HQ9Y535 204 aaPredicted RBP7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 INTS1Q8N201 2190 aaKnown RBP7.8□□□□□ -1.16
SFSWAP-202ENST00000535202 SERTM1A2A2V5 107 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 ANKRD34BA5PLL1 514 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 PRAMEF25A6NGN4 478 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 KDM4EB2RXH2 506 aaPredicted RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 COPEO14579 308 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 SNPHO15079 494 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 PLIN3O60664 434 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 ICOSLGO75144 302 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 REM1O75628 298 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 BCAS2O75934 225 aaPredicted RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 ANXA4P09525 319 aaPredicted RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 DRD5P21918 477 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 DCKP27707 260 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 PTPN6P29350 595 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 KRT20P35900 424 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 PTGDSP41222 190 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 PPICP45877 212 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 GSTM5P46439 218 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 NAGLUP54802 743 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 WNT3P56703 355 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 ZNF763Q0D2J5 394 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 C2orf80Q0P641 193 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 MYBPHQ13203 477 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 OXA1LQ15070 435 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 SLC25A35Q3KQZ1 300 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 GRAMD1BQ3KR37 738 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 ANKDD1AQ495B1 522 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 ACSF3Q4G176 576 aaPredicted RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 WIPI1Q5MNZ9 446 aaPredicted RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 CCNJQ5T5M9 372 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 TIGD3Q6B0B8 471 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 GALNT18Q6P9A2 607 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 FRMD7Q6ZUT3 714 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 SEM1Q6ZVN7 128 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 DMRTC2Q8IXT2 367 aaPredicted RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 SAMD14Q8IZD0 417 aaPredicted RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 CLYBLQ8N0X4 340 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 C4orf33Q8N1A6 199 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 FAM83FQ8NEG4 500 aaPredicted RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 RDH11Q8TC12 318 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 SLC26A7Q8TE54 656 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 CHAC2Q8WUX2 184 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 TMCO6Q96DC7 493 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 APOPT1Q96IL0 206 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 COL21A1Q96P44 957 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 BBS4Q96RK4 519 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 TIMP4Q99727 224 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 ZNF559Q9BR84 538 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 UGT2B28Q9BY64 529 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 YTHDF1Q9BYJ9 559 aaKnown RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 PAIP1Q9H074 479 aaKnown RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 C12orf65Q9H3J6 166 aaKnown RBP7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 FOLH1BQ9HBA9 442 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 SERHLQ9NQF3 203 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 MIEF1Q9NQG6 463 aa7.79□□□□□ -1.16
SFSWAP-202ENST00000535202 SLC35C2Q9NQQ7 365 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms