RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 HSPB3Q12988 150 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 ZNHIT3Q15649 155 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 GRAMD1BQ3KR37 738 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 XKR7Q5GH72 579 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 ARL13AQ5H913 290 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 ZCCHC12Q6PEW1 402 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 LUZP2Q86TE4 346 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 GRAMD2AQ8IUY3 354 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 METTL25Q8N6Q8 603 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 CDRT4Q8N9R6 151 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 NUP43Q8NFH3 380 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 CEP70Q8NHQ1 597 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 TWIST2Q8WVJ9 160 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 PIK3R3Q92569 461 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 PIGTQ969N2 578 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 TRIM44Q96DX7 344 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 MTERF3Q96E29 417 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 ZBED6CLQ96FA7 236 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 DACH2Q96NX9 599 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 TSSK3Q96PN8 268 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 FAM111AQ96PZ2 611 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 PIGQQ9BRB3 760 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 MECRQ9BV79 373 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 ROPN1BQ9BZX4 212 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 ROPN1Q9HAT0 212 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 C3orf14Q9HBI5 128 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 SIRT3Q9NTG7 399 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 GIN1Q9NXP7 522 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 GALNT8Q9NY28 637 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 ATP6V1HQ9UI12 483 aa9.06□□□□□ -0.96
CLSTN3-203ENST00000534830 TLDC2A0PJX2 215 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 EMC8O43402 210 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 AKAP10O43572 662 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 KCNK2O95069 426 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 KCNH1O95259 989 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 OXSR1O95747 527 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 F12P00748 615 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 CREB1P16220 341 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 TBXA2RP21731 343 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 TCEA1P23193 301 aaKnown RBP9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 LCN1P31025 176 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 ETV4P43268 484 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 ASMTP46597 345 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 MANFP55145 182 aaKnown RBP9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 CLDN20P56880 219 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 RPL38P63173 70 aaKnown RBP9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 MFSD12Q6NUT3 480 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 VWA1Q6PCB0 445 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 ZNF474Q6S9Z5 364 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 ZAR1Q86SH2 424 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 EXOC3L1Q86VI1 746 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 GCNT2Q8N0V5 402 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 SLC16A11Q8NCK7 471 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 OR5M1Q8NGP8 315 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 OR4C3Q8NH37 302 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 CLHC1Q8NHS4 586 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 ZFP28Q8NHY6 868 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 PSMA8Q8TAA3 256 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 TCP10LQ8TDR4 215 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 AENQ8WTP8 325 aaKnown RBP9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 FIG4Q92562 907 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 PPCDCQ96CD2 204 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 C3orf30Q96M34 536 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 PIP5K1AQ99755 562 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 PTGES2Q9H7Z7 377 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 RNF122Q9H9V4 155 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 EQTNQ9NQ60 294 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 FBXO34Q9NWN3 711 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 SH3BP4Q9P0V3 963 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 ZDHHC2Q9UIJ5 367 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 PACSIN3Q9UKS6 424 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 FIS1Q9Y3D6 152 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 AP4B1Q9Y6B7 739 aa9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 RAI1Q7Z5J4 1906 aaPredicted RBP9.05□□□□□ -0.96
CLSTN3-203ENST00000534830 SLC22A20A6NK97 555 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 PIP5K1BO14986 540 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 WIPF1O43516 503 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 TYROBPO43914 113 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 CNOT4O95628 575 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 CHEK2O96017 543 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 PSMA4P25789 261 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 GPC1P35052 558 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 SERPINB5P36952 375 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 CLK3P49761 638 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 PRKAG1P54619 331 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 DIO3P55073 304 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 EEFSECP57772 596 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 FAM27E3Q08E93 113 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 STX5Q13190 355 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 DUSP5Q16690 384 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 GALNTL6Q49A17 601 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 VPS26BQ4G0F5 336 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 RAET1LQ5VY80 246 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 OR2A2Q6IF42 318 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 WDR93Q6P2C0 686 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 LRIG3Q6UXM1 1119 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 ZCCHC23Q6ZST2 131 aa9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 R3HCC1LQ7Z5L2 792 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-203ENST00000534830 BTLAQ7Z6A9 289 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms