RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 FADS6Q8N9I5 356 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 OR4K17Q8NGC6 315 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 OR5M1Q8NGP8 315 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 NPAS1Q99742 590 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 CPPED1Q9BRF8 314 aaPredicted RBP12.76□□□□□ -0.37
VPS11-205ENST00000534551 SLC39A3Q9BRY0 314 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 G6PC3Q9BUM1 346 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 DSN1Q9H410 356 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 LDAHQ9H6V9 325 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 EXO5Q9H790 373 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.76□□□□□ -0.37
VPS11-205ENST00000534551 ERRFI1Q9UJM3 462 aaPredicted RBP12.76□□□□□ -0.37
VPS11-205ENST00000534551 DKKL1Q9UK85 242 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 USP9XQ93008 2570 aaPredicted RBP12.76□□□□□ -0.37
VPS11-205ENST00000534551 TRGV5A0A0B4J1U4 118 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 GMNCA6NCL1 334 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 ALG1L2C9J202 215 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 CLIC1O00299 241 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 ANGPT2O15123 496 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 KIAA0513O60268 411 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 H6PDO95479 791 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 HPNP05981 417 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 BCHEP06276 602 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 SNRPB2P08579 225 aaKnown RBP12.75□□□□□ -0.37
VPS11-205ENST00000534551 CRATP43155 626 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 DSTNP60981 165 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 PLAURQ03405 335 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 KCNC4Q03721 635 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 CHRNEQ04844 493 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 SLC10A1Q14973 349 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 MAPK14Q16539 360 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 KRTCAP3Q53RY4 240 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 PDZK1Q5T2W1 519 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 REP15Q6BDI9 236 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 FJX1Q86VR8 437 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 RPRMLQ8N4K4 120 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 OR5M9Q8NGP3 310 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 DUSP19Q8WTR2 217 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 MAL2Q969L2 176 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 UBQLN4Q9NRR5 601 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 PNPLA3Q9NST1 481 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 LEF1Q9UJU2 399 aaPredicted RBP12.75□□□□□ -0.37
VPS11-205ENST00000534551 RPH3AQ9Y2J0 694 aaPredicted RBP12.75□□□□□ -0.37
VPS11-205ENST00000534551 NDUFAF1Q9Y375 327 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 WDR45Q9Y484 360 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 CAPN7Q9Y6W3 813 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 BAHCC1Q9P281 2608 aa12.75□□□□□ -0.37
VPS11-205ENST00000534551 C15orf38-AP3S2A0A0A6YYH1 394 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 DUXAA6NLW8 204 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 CLDN24A6NM45 220 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 KDM4EB2RXH2 506 aaPredicted RBP12.74□□□□□ -0.37
VPS11-205ENST00000534551 FXYD1O00168 92 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 SCDO00767 359 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 NDUFB5O43674 189 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 SNX3O60493 162 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 STX11O75558 287 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 UGT2B17O75795 530 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 KRT75O95678 551 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 TPOP07202 933 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 NGFRP08138 427 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 STSP08842 583 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 PTGS2P35354 604 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 MTPNP58546 118 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 IRX1P78414 480 aaPredicted RBP12.74□□□□□ -0.37
VPS11-205ENST00000534551 ZNF117Q03924 483 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 NFYCQ13952 458 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 EMC4Q5J8M3 183 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 ATAD3BQ5T9A4 648 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 ARHGAP11AQ6P4F7 1023 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 CBLN3Q6UW01 205 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 ARSKQ6UWY0 536 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 BNC2Q6ZN30 1099 aaPredicted RBP12.74□□□□□ -0.37
VPS11-205ENST00000534551 TREML1Q86YW5 311 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 ZNF619Q8N2I2 560 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 NEIL3Q8TAT5 605 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 PHOSPHO1Q8TCT1 267 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 ZNF524Q96C55 264 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 ZG16BQ96DA0 208 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 OR2B2Q9GZK3 357 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 NSRP1Q9H0G5 558 aaKnown RBP12.74□□□□□ -0.37
VPS11-205ENST00000534551 SLC38A1Q9H2H9 487 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 EXD2Q9NVH0 621 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 TMEM45AQ9NWC5 275 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 ZNF835Q9Y2P0 537 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 L3MBTL1Q9Y468 752 aa12.74□□□□□ -0.37
VPS11-205ENST00000534551 DOCK7Q96N67 2140 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 A0A1B0GVC2 190 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 AQP7O14520 342 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 AK1P00568 194 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 HPGDP15428 266 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 CA7P43166 264 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 ATP12AP54707 1039 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 HPCAP84074 193 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 RBPJQ06330 500 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 CRYZQ08257 329 aaKnown RBP12.73□□□□□ -0.37
VPS11-205ENST00000534551 RGNQ15493 299 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 KLHL26Q53HC5 615 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 Q6ZPB1 254 aaPredicted RBP12.73□□□□□ -0.37
VPS11-205ENST00000534551 CPLX4Q7Z7G2 160 aa12.73□□□□□ -0.37
VPS11-205ENST00000534551 MTDHQ86UE4 582 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms