RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 JRKLQ9Y4A0 524 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 OR10H1Q9Y4A9 318 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 PKD1L1Q8TDX9 2849 aa6.9□□□□□ -1.31
NXF1-215ENST00000533440 CCDC189A1A4V9 331 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 NDUFS8O00217 210 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 KIAA0513O60268 411 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 SEC31AO94979 1220 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 PGM3O95394 542 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 IL33O95760 270 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 ANGPTL1O95841 491 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 OPN1LWP04000 364 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 PABPC4LP0CB38 370 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 GFAPP14136 432 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 ALDH9A1P49189 494 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 CLK3P49761 638 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 PRR5P85299 388 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 CSTF3Q12996 717 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 RNPS1Q15287 305 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 ZNF239Q16600 458 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 DECR1Q16698 335 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 CR1LQ2VPA4 569 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 TIMM23BQ5SRD1 257 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 PDSS1Q5T2R2 415 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 CPTPQ5TA50 214 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 HBMQ6B0K9 141 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 Q6ZT83 130 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 RAPH1Q70E73 1250 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 CYS1Q717R9 158 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 CMC1Q7Z7K0 106 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 CENPLQ8N0S6 344 aaPredicted RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 FBXL14Q8N1E6 418 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 SPC24Q8NBT2 197 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 OR7G2Q8NG99 324 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 ABHD3Q8WU67 409 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 ZFAND2BQ8WV99 257 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 CDKL2Q92772 493 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 OSTF1Q92882 214 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 ZBTB8AQ96BR9 441 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 KCTD12Q96CX2 325 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 MTBPQ96DY7 904 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 C12orf65Q9H3J6 166 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 NOL11Q9H8H0 719 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 TXNDC16Q9P2K2 825 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 MGAT4BQ9UQ53 548 aa6.89□□□□□ -1.31
NXF1-215ENST00000533440 TNPO3Q9Y5L0 923 aaKnown RBP6.89□□□□□ -1.31
NXF1-215ENST00000533440 IGHV4-61A0A0C4DH41 118 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 FAM159BA6NKW6 160 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 COQ9O75208 318 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 LYZL6O75951 148 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 LY6HO94772 140 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 PSMG1O95456 288 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 TGFAP01135 160 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 YES1P07947 543 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 COL6A2P12110 1019 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 APEHP13798 732 aaKnown RBP6.88□□□□□ -1.31
NXF1-215ENST00000533440 COX5AP20674 150 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 CRABP2P29373 138 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 CDC25BP30305 580 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 SSTR1P30872 391 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 SPRP35270 261 aaPredicted RBP6.88□□□□□ -1.31
NXF1-215ENST00000533440 NR4A2P43354 598 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 FABP6P51161 128 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 CCNG1P51959 295 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 CARD18P57730 90 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 ZNF155Q12901 538 aaPredicted RBP6.88□□□□□ -1.31
NXF1-215ENST00000533440 IFT88Q13099 833 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 TRAF3Q13114 568 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 GGTLC2Q14390 218 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 STK11Q15831 433 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 PLPPR5Q32ZL2 321 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 GGTA1PQ4G0N0 100 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 SH2D4BQ5SQS7 431 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 GRTP1Q5TC63 336 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 ZNF544Q6NX49 715 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 TMEM108Q6UXF1 575 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 B3GLCTQ6Y288 498 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 TRABD2AQ86V40 505 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 P2RY8Q86VZ1 359 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 ZBED8Q8IZ13 594 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 SAMD14Q8IZD0 417 aaPredicted RBP6.88□□□□□ -1.31
NXF1-215ENST00000533440 POC1BQ8TC44 478 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 ACTRT2Q8TDY3 377 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 CPNE4Q96A23 557 aaPredicted RBP6.88□□□□□ -1.31
NXF1-215ENST00000533440 MUCL1Q96DR8 90 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 KLHL15Q96M94 604 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 RNF145Q96MT1 663 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 OSBPL9Q96SU4 736 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 SRXN1Q9BYN0 137 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 TBL1XR1Q9BZK7 514 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 TMEM185BQ9H7F4 350 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 BRF2Q9HAW0 419 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 PFDN4Q9NQP4 134 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 ING1Q9UK53 422 aaPredicted RBP6.88□□□□□ -1.31
NXF1-215ENST00000533440 SLC12A4Q9UP95 1085 aa6.88□□□□□ -1.31
NXF1-215ENST00000533440 ARFGEF3Q5TH69 2177 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 A0A087WV62 115 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 A0A0A6YYJ9 748 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 A0A1W2PRB8 838 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 TCRBV9S1A1TA0A576 114 aa6.87□□□□□ -1.31
NXF1-215ENST00000533440 OR5H1A6NKK0 313 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms