RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 EPXP11678 715 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 DPP4P27487 766 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 MAP3K8P41279 467 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 FRKP42685 505 aaPredicted RBP10.23□□□□□ -0.77
CLCF1-202ENST00000533438 DGKQP52824 942 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 SF3A3Q12874 501 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLCF1-202ENST00000533438 BCL2A1Q16548 175 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 DECR1Q16698 335 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 LSM12Q3MHD2 195 aaKnown RBP10.23□□□□□ -0.77
CLCF1-202ENST00000533438 METTL21CQ5VZV1 264 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 CDC20BQ86Y33 519 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 KIF18BQ86Y91 864 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 OR2M3Q8NG83 312 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 TUBGCP3Q96CW5 907 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 PPP1R36Q96LQ0 422 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 PPP3R2Q96LZ3 170 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 SFXN2Q96NB2 322 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 OR52B2Q96RD2 323 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 FOXC2Q99958 501 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 DSN1Q9H410 356 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 AKTIPQ9H8T0 292 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 Q9N2J8 555 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 C1orf109Q9NX04 203 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 PPP4R1LQ9P1A2 415 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 ST6GALNAC2Q9UJ37 374 aa10.23□□□□□ -0.77
CLCF1-202ENST00000533438 RPH3AQ9Y2J0 694 aaPredicted RBP10.23□□□□□ -0.77
CLCF1-202ENST00000533438 PRRC2AP48634 2157 aaKnown RBP10.23□□□□□ -0.77
CLCF1-202ENST00000533438 GOLGA8QA0A0J9YX86 632 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 GOLGA8OA6NCC3 632 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 TUBAL3A6NHL2 446 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 GOLGA8NF8WBI6 632 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 PDPK1O15530 556 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 SCO2O43819 266 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 GOSR1O95249 250 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 CD99P14209 185 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 LBPP18428 481 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 SDC1P18827 310 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 CLDN15P56746 228 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 GABPB1Q06547 395 aaPredicted RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 GANABQ14697 944 aaKnown RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 ZNHIT3Q15649 155 aaPredicted RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 ATP6AP1LQ52LC2 224 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 RFTN2Q52LD8 501 aaPredicted RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 ZNF385BQ569K4 471 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 C6orf136Q5SQH8 315 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 ZNF551Q7Z340 670 aaPredicted RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 GCNT2Q8N0V5 402 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 CCDC197Q8NCU1 140 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 OR4K17Q8NGC6 315 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 LINC01560Q8TB33 94 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 GFM2Q969S9 779 aaKnown RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 INTS12Q96CB8 462 aaKnown RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 RMND5BQ96G75 393 aaPredicted RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 RBM24Q9BX46 236 aaKnown RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 LRTM1Q9HBL6 345 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 CCM2LQ9NUG4 571 aaPredicted RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 FAM120CQ9NX05 1096 aaKnown RBP10.22□□□□□ -0.77
CLCF1-202ENST00000533438 MED11Q9P086 117 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 NTMQ9P121 344 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 TMED5Q9Y3A6 229 aa10.22□□□□□ -0.77
CLCF1-202ENST00000533438 AKAP6Q13023 2319 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 TTC36A6NLP5 189 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 PEX11AO75192 247 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 TNFSF13O75888 250 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 TGM6O95932 706 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 IGKV1D-16P01601 117 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 PEPDP12955 493 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 FOSL1P15407 271 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 TCEA1P23193 301 aaKnown RBP10.21□□□□□ -0.77
CLCF1-202ENST00000533438 PSMD4P55036 377 aaKnown RBP10.21□□□□□ -0.77
CLCF1-202ENST00000533438 IRX1P78414 480 aaPredicted RBP10.21□□□□□ -0.77
CLCF1-202ENST00000533438 EMX2Q04743 252 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 HSPB3Q12988 150 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 MAD2L1Q13257 205 aaPredicted RBP10.21□□□□□ -0.77
CLCF1-202ENST00000533438 PDE7AQ13946 482 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 NXNQ6DKJ4 435 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 ANKRD26P1Q6NSI1 321 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 SPATA19Q7Z5L4 167 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 LUZP2Q86TE4 346 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 TGIF2LYQ8IUE0 185 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 GRAMD2AQ8IUY3 354 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 GOT1L1Q8NHS2 421 aaPredicted RBP10.21□□□□□ -0.77
CLCF1-202ENST00000533438 CIDECQ96AQ7 238 aaPredicted RBP10.21□□□□□ -0.77
CLCF1-202ENST00000533438 GIMAP5Q96F15 307 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 PIGMQ9H3S5 423 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 REEP4Q9H6H4 257 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 DLL4Q9NR61 685 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 SDHAF3Q9NRP4 125 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 GALNT8Q9NY28 637 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 ASIC5Q9NY37 505 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.21□□□□□ -0.77
CLCF1-202ENST00000533438 MRTO4Q9UKD2 239 aaKnown RBP10.21□□□□□ -0.77
CLCF1-202ENST00000533438 TRIM33Q9UPN9 1127 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 ZNF337Q9Y3M9 751 aa10.21□□□□□ -0.77
CLCF1-202ENST00000533438 VPS13CQ709C8 3753 aa10.21□□□□□ -0.78
CLCF1-202ENST00000533438 IGLV3-32A0A0A0MS00 114 aa10.2□□□□□ -0.78
CLCF1-202ENST00000533438 A0A1W2PNV4 684 aa10.2□□□□□ -0.78
CLCF1-202ENST00000533438 GXYLT2A0PJZ3 443 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms