RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 NTNG1Q9Y2I2 539 aa20.22■□□□□ 0.83
PACSIN3-209ENST00000532457 MRPS18BQ9Y676 258 aaKnown RBP20.22■□□□□ 0.83
PACSIN3-209ENST00000532457 DLGAP1O14490 977 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 KLK10O43240 276 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 DPM1O60762 260 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 DNAJB5O75953 348 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 GANABQ14697 944 aaKnown RBP20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 LARS2Q15031 903 aaKnown RBP20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 MRPL2Q5T653 305 aaKnown RBP20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 DEF8Q6ZN54 512 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 LSRQ86X29 649 aaPredicted RBP20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 ELP5Q8TE02 316 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 ARSGQ96EG1 525 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 ADOQ96SZ5 270 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 PIP5K1AQ99755 562 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 PCDHGA10Q9Y5H3 936 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 CFAP47Q6ZTR5 3102 aa20.21■□□□□ 0.83
PACSIN3-209ENST00000532457 G3V2T6 193 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 TSPAN2O60636 221 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 RHCEP18577 417 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 ABCD3P28288 659 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 OTX2P32243 289 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 ATP12AP54707 1039 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 FOXD4Q12950 439 aaPredicted RBP20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 PIN1Q13526 163 aaPredicted RBP20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 SSPNQ14714 243 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 OTUD3Q5T2D3 398 aaPredicted RBP20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 APOOLQ6UXV4 268 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 STK32CQ86UX6 486 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 C17orf47Q8NEP4 570 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 OR52J3Q8NH60 311 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 OR5K1Q8NHB7 308 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 DIO2Q92813 273 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 TP53INP1Q96A56 240 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 ZNF347Q96SE7 839 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 C9orf16Q9BUW7 83 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 SMURF2Q9HAU4 748 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 CNOT11Q9UKZ1 510 aaKnown RBP20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 A4GNTQ9UNA3 340 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 LYVE1Q9Y5Y7 322 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 LAMA5O15230 3695 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 CHD8Q9HCK8 2581 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 ACACAQ13085 2346 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 CDHR4A6H8M9 788 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 EI24O14681 340 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 REM1O75628 298 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 RASAL1O95294 804 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 PRG2P13727 222 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 ITGA2P17301 1181 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 BTBD16Q32M84 506 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 LIN52Q52LA3 116 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 LRRC69Q6ZNQ3 347 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 OR4C15Q8NGM1 316 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 PHF10Q8WUB8 498 aaKnown RBP20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 CNOT9Q92600 299 aaKnown RBP20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 HSPBAP1Q96EW2 488 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 ZNF184Q99676 751 aaPredicted RBP20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 IL17BQ9UHF5 180 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 SLC9A8Q9Y2E8 581 aa20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 SAMHD1Q9Y3Z3 626 aaKnown RBP20.2■□□□□ 0.82
PACSIN3-209ENST00000532457 A0A1W2PQ72 361 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 WWP2O00308 870 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 GKN3PP0CG01 181 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 LIFP15018 202 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 ZNF136P52737 540 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 CDH12P55289 794 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 IL10RAQ13651 578 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 KLHL26Q53HC5 615 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 NDUFAF7Q7L592 441 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 CATSPER1Q8NEC5 780 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 OR8K3Q8NH51 312 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 NUBPLQ8TB37 319 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 DNAJC9Q8WXX5 260 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 ZCCHC14Q8WYQ9 949 aaKnown RBP20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 OMA1Q96E52 524 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 CCNL2Q96S94 520 aaPredicted RBP20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 RTN4RQ9BZR6 473 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 VCX3BQ9H321 246 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 CTPS2Q9NRF8 586 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 ACAD8Q9UKU7 415 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 FAM32AQ9Y421 112 aaKnown RBP20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 APC2O95996 2303 aa20.19■□□□□ 0.82
PACSIN3-209ENST00000532457 ABCB7O75027 752 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 ADAM11O75078 769 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 E2F6O75461 281 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 ZFAND5O76080 213 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 UTS2O95399 124 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 NADKO95544 446 aaPredicted RBP20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 IGHEP01854 428 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 CYP4B1P13584 511 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 DNAJA1P31689 397 aaKnown RBP20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 LIMS1P48059 325 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 HMGA2P52926 109 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 SPIBQ01892 262 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 RNF220Q5VTB9 566 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 SHQ1Q6PI26 577 aaKnown RBP20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 ZDHHC13Q8IUH4 622 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 SLC34A3Q8N130 599 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 ZNF614Q8N883 585 aa20.18■□□□□ 0.82
PACSIN3-209ENST00000532457 REEP1Q9H902 201 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms