RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PCDHGB3Q9Y5G1 929 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 FAM215AQ9Y5M1 114 aa12.66□□□□□ -0.38
TSPAN4-220ENST00000532375 HECTD1Q9ULT8 2610 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 A0A0G2JND7 137 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 CENPVL1A0A0U1RR11 272 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 RFXANKO14593 260 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 OIP5O43482 229 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 CLDN1O95832 211 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 ATP12AP54707 1039 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 SQLEQ14534 574 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 CDSNQ15517 529 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 CD226Q15762 336 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 TMEM44Q2T9K0 475 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 PAGE3Q5JUK9 113 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 METTL21CQ5VZV1 264 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 TNFAIP8L2Q6P589 184 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 RNF130Q86XS8 419 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 PHF10Q8WUB8 498 aaKnown RBP12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 XAGE5Q8WWM1 108 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 ZG16BQ96DA0 208 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 CHMP6Q96FZ7 201 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 WDYHV1Q96HA8 205 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 TMEM120AQ9BXJ8 343 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 TBL1XR1Q9BZK7 514 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 PRDM14Q9GZV8 571 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 ZNF350Q9GZX5 532 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 TP63Q9H3D4 680 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 SLC25A37Q9NYZ2 338 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 CCDC167Q9P0B6 97 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 PPP4R1LQ9P1A2 415 aa12.65□□□□□ -0.38
TSPAN4-220ENST00000532375 TRBV5-3A0A0A0MS03 114 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 KDM4EB2RXH2 506 aaPredicted RBP12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 DPP4P27487 766 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 DCTP40126 519 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 CASP6P55212 293 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 DSCR4P56555 118 aaPredicted RBP12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 STX1BP61266 288 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 STX5Q13190 355 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF141Q15928 474 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 MAPK14Q16539 360 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 AGKQ53H12 422 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 LRIF1Q5T3J3 769 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 TYW3Q6IPR3 259 aaKnown RBP12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 SEM1Q6ZVN7 128 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 TRIML2Q8N7C3 387 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF524Q96C55 264 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 SPDL1Q96EA4 605 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 C1GALT1C1Q96EU7 318 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 AURKBQ96GD4 344 aaPredicted RBP12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 ITCHQ96J02 903 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 NMUR2Q9GZQ4 415 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 HOXD1Q9GZZ0 328 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 TPT1P8Q9HAU6 139 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 TAS2R10Q9NYW0 307 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 ACAD8Q9UKU7 415 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 PCDHB14Q9Y5E9 798 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 GMEB1Q9Y692 573 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 CACNA1CQ13936 2221 aa12.64□□□□□ -0.39
TSPAN4-220ENST00000532375 A0A096LPI6 279 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 NDUFB5O43674 189 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 STX11O75558 287 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 UGT2B17O75795 530 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 ACTL6AO96019 429 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 AK1P00568 194 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 VIMP08670 466 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 CPN1P15169 458 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 ACVR2AP27037 513 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 CHI3L1P36222 383 aaPredicted RBP12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 MAGEA8P43361 318 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 CLK3P49761 638 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 PER3P56645 1201 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 CLDN15P56746 228 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 PLAURQ03405 335 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 TOMM20Q15388 145 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 FLYWCH1Q4VC44 716 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 WLSQ5T9L3 541 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 CBLN3Q6UW01 205 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 ARSKQ6UWY0 536 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 DLEU7Q6UYE1 221 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 DNAJC14Q6Y2X3 702 aaPredicted RBP12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 FRRS1Q6ZNA5 592 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 ULK2Q8IYT8 1036 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 C10orf111Q8N326 155 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 ANKFN1Q8N957 763 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 GATSQ8NAP1 163 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 OR4K17Q8NGC6 315 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 PNPT1Q8TCS8 783 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 ABTB1Q969K4 478 aaPredicted RBP12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 ROPN1LQ96C74 230 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 NPAS1Q99742 590 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 SLC38A1Q9H2H9 487 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 EXO5Q9H790 373 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 RMND5AQ9H871 391 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 EXD2Q9NVH0 621 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 MKLN1Q9UL63 735 aa12.63□□□□□ -0.39
TSPAN4-220ENST00000532375 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 C15orf38-AP3S2A0A0A6YYH1 394 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 A0A1W2PP18 115 aa12.62□□□□□ -0.39
TSPAN4-220ENST00000532375 DNAJA2O60884 412 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms