RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 THBS1P07996 1170 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 FUT4P22083 530 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 DAPP51397 102 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 GK3PQ14409 553 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 MAPK14Q16539 360 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 EXOC3L2Q2M3D2 409 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 SLC36A3Q495N2 470 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 FLYWCH1Q4VC44 716 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 ZNF836Q6ZNA1 936 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 ZAR1Q86SH2 424 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 CHERPQ8IWX8 916 aaKnown RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 CLIP4Q8N3C7 705 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 ATG16L2Q8NAA4 619 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 ART5Q96L15 291 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 CCNL2Q96S94 520 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 RLIMQ9NVW2 624 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 KLHL28Q9NXS3 571 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 KIF17Q9P2E2 1029 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 KCNE5Q9UJ90 142 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 CFL2Q9Y281 166 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 GPR55Q9Y2T6 319 aaPredicted RBP13.3□□□□□ -0.28
TTC39A-216ENST00000530004 OR10H1Q9Y4A9 318 aa13.3□□□□□ -0.28
TTC39A-216ENST00000530004 FREM2Q5SZK8 3169 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 AKAP13Q12802 2813 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 A0A1W2PQ72 361 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 FRS3O43559 492 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 UGT2B17O75795 530 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 IGKV1D-16P01601 117 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 UBTFL6P0CB48 400 aaPredicted RBP13.29□□□□□ -0.28
TTC39A-216ENST00000530004 IGFBP5P24593 272 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 PIGAP37287 484 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 CAPGP40121 348 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 EEF1A1P68104 462 aaKnown RBP13.29□□□□□ -0.28
TTC39A-216ENST00000530004 FOXD4Q12950 439 aaPredicted RBP13.29□□□□□ -0.28
TTC39A-216ENST00000530004 NPTX1Q15818 432 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 LIN52Q52LA3 116 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 COLEC12Q5KU26 742 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 RAB43Q86YS6 212 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 OR11G2Q8NGC1 345 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 GIPC3Q8TF64 312 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 PHF10Q8WUB8 498 aaKnown RBP13.29□□□□□ -0.28
TTC39A-216ENST00000530004 LPAR4Q99677 370 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 WDR77Q9BQA1 342 aaPredicted RBP13.29□□□□□ -0.28
TTC39A-216ENST00000530004 NUDT9Q9BW91 350 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 ANKRD60Q9BZ19 345 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 TOR3AQ9H497 397 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 NMNAT1Q9HAN9 279 aaPredicted RBP13.29□□□□□ -0.28
TTC39A-216ENST00000530004 UBAP1Q9NZ09 502 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 CBLCQ9ULV8 474 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 A4GNTQ9UNA3 340 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 PCDHGB5Q9Y5G0 923 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 ORC6Q9Y5N6 252 aa13.29□□□□□ -0.28
TTC39A-216ENST00000530004 CCDC88CQ9P219 2028 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 CELSR3Q9NYQ7 3312 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 IGHV1-45A0A0A0MS14 117 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 EFSO43281 561 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 PRKNO60260 465 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-216ENST00000530004 GUSBP08236 651 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 COX6A1P12074 109 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 NID1P14543 1247 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 LIMS1P48059 325 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 HMGA2P52926 109 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 RAD23AP54725 363 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 PIN1Q13526 163 aaPredicted RBP13.28□□□□□ -0.28
TTC39A-216ENST00000530004 PCOLCEQ15113 449 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 MICAQ29983 383 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 EIPR1Q53HC9 387 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 KDM4DQ6B0I6 523 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 PAPD4Q6PIY7 484 aaKnown RBP13.28□□□□□ -0.28
TTC39A-216ENST00000530004 GALNT5Q7Z7M9 940 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 MRGPREQ86SM8 312 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 SPACA3Q8IXA5 215 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 TAGAPQ8N103 731 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 BCORP1Q8N888 145 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 ZSCAN1Q8NBB4 408 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 OR10G2Q8NGC3 310 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 OR1N1Q8NGS0 311 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 PMM1Q92871 262 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 MBOAT4Q96T53 435 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 ZNF700Q9H0M5 742 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 COPS7AQ9UBW8 275 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 ACAD8Q9UKU7 415 aa13.28□□□□□ -0.28
TTC39A-216ENST00000530004 APC2O95996 2303 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 SAGE2PA6NJ88 616 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 EIF4E1BA6NMX2 242 aaKnown RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 RRP8O43159 456 aaKnown RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 SEC24DO94855 1032 aaPredicted RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 H1F0P07305 194 aaKnown RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 GNAO1P09471 354 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 PPICP45877 212 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 RNF144AP50876 292 aaPredicted RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 RGS8P57771 180 aaPredicted RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 ADARB1P78563 741 aaKnown RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 IL1RL1Q01638 556 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 EPS8Q12929 822 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 CRTC2Q53ET0 693 aaPredicted RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 FGD3Q5JSP0 725 aa13.27□□□□□ -0.28
TTC39A-216ENST00000530004 SWT1Q5T5J6 900 aaKnown RBP13.27□□□□□ -0.28
TTC39A-216ENST00000530004 MRPL2Q5T653 305 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms