RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 PCDHGB2Q9Y5G2 931 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 PCDHGA10Q9Y5H3 936 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 XPNPEP2O43895 674 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 IGKV1D-16P01601 117 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 MMP11P24347 488 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 OR1Q1Q15612 314 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 NEDD8Q15843 81 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 AP1ARQ63HQ0 302 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 PTCHD4Q6ZW05 846 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 ZNF550Q7Z398 422 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 B3GNT8Q7Z7M8 397 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 ZAR1Q86SH2 424 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 SLC38A9Q8NBW4 561 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 MORN4Q8NDC4 146 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 CTRCQ99895 268 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 TEX12Q9BXU0 123 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 CCNB1IP1Q9NPC3 277 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 NTNG1Q9Y2I2 539 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 R4GN57 208 aa13.13□□□□□ -0.31
CHEK1-210ENST00000528276 TP53BP1Q12888 1972 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-210ENST00000528276 FRG2CA6NGY1 282 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 ZAR1LA6NP61 321 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 NTN3O00634 580 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-210ENST00000528276 SCDO00767 359 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 CPNE3O75131 537 aaKnown RBP13.12□□□□□ -0.31
CHEK1-210ENST00000528276 TIAF1O95411 115 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 DRD5P21918 477 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 TTKP33981 857 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 ZNF141Q15928 474 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHEK1-210ENST00000528276 FOXB2Q5VYV0 432 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 TMEM236Q5W0B7 351 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 MBOAT2Q6ZWT7 520 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 COX15Q7KZN9 410 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 CMIPQ8IY22 773 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 CDK20Q8IZL9 346 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 ZNF321PQ8N8H1 164 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 OR1N1Q8NGS0 311 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 ZNF721Q8TF20 911 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 IPCEF1Q8WWN9 437 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-210ENST00000528276 UBE2FQ969M7 185 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 EFHD2Q96C19 240 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-210ENST00000528276 YIPF3Q9GZM5 350 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 C11orf16Q9NQ32 467 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 SIDT1Q9NXL6 827 aaKnown RBP13.12□□□□□ -0.31
CHEK1-210ENST00000528276 RPS6KB2Q9UBS0 482 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 AASSQ9UDR5 926 aa13.12□□□□□ -0.31
CHEK1-210ENST00000528276 GPN3Q9UHW5 284 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-210ENST00000528276 TNRC6BQ9UPQ9 1833 aaKnown RBP13.11□□□□□ -0.31
CHEK1-210ENST00000528276 CACNA1EQ15878 2313 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 TRIM64CA6NLI5 447 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 OR6C76A6NM76 312 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 IDSB3KWA1 339 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 DDAH2O95865 285 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 CSTAP01040 98 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 CLPSP04118 112 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 IGKV3-11P04433 115 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 KLK3P07288 261 aaPredicted RBP13.11□□□□□ -0.31
CHEK1-210ENST00000528276 FGF5P12034 268 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 PRG2P13727 222 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 ACP1P24666 158 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 IL12BP29460 328 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 ALDH3B2P48448 385 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 ZNF136P52737 540 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 CD300LDQ6UXZ3 194 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 OVCH1Q7RTY7 1134 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 PRICKLE2Q7Z3G6 844 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 GRAMD2AQ8IUY3 354 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 CCDC71Q8IV32 467 aaPredicted RBP13.11□□□□□ -0.31
CHEK1-210ENST00000528276 NKAIN4Q8IVV8 208 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 RHOXF1Q8NHV9 184 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 TEX47Q8TBZ9 253 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 CNOT9Q92600 299 aaKnown RBP13.11□□□□□ -0.31
CHEK1-210ENST00000528276 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
CHEK1-210ENST00000528276 NUDT9Q9BW91 350 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 TRIM2Q9C040 744 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 APMAPQ9HDC9 416 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 UBQLN4Q9NRR5 601 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 CLN6Q9NWW5 311 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 IGLV3-12A0A075B6K2 115 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 LNP1A1A4G5 178 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 SERINC4A6NH21 518 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 OR6B1O95007 311 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 EMP2P54851 167 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 COPZ1P61923 177 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 TSPAN31Q12999 210 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 FGFBP1Q14512 234 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 ZBED5Q49AG3 693 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 CCDC157Q569K6 752 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 ZNF613Q6PF04 617 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 LANCL3Q6ZV70 420 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 NRMQ8IXM6 262 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 NLGN4XQ8N0W4 816 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 SPARTQ8N0X7 666 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 GRHL3Q8TE85 626 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 SLC35B4Q969S0 331 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 Q96MT0 163 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 NXF5Q9H1B4 397 aaKnown RBP13.11□□□□□ -0.31
CHEK1-210ENST00000528276 SLC22A11Q9NSA0 550 aa13.11□□□□□ -0.31
CHEK1-210ENST00000528276 REV1Q9UBZ9 1251 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms