RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TPST1O60507 370 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 DNAJA2O60884 412 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 SNX4O95219 450 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 ANGPTL1O95841 491 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 AGR2O95994 175 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 P04436 131 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 BCHEP06276 602 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 CELA3AP09093 270 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 IL12BP29460 328 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 PGM1P36871 562 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 DCTP40126 519 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 ADH7P40394 386 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 NUDT2P50583 147 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 PSMD4P55036 377 aaKnown RBP9.82□□□□□ -0.84
NEDD8-205ENST00000527046 MLLT10P55197 1068 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 FOXK1P85037 733 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 CDK6Q00534 326 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 FXNQ16595 210 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 VMACQ2NL98 169 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 NDUFAF6Q330K2 333 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 PDZK1Q5T2W1 519 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 TIGD3Q6B0B8 471 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 OR5M10Q6IEU7 315 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 CBLN3Q6UW01 205 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 BNC2Q6ZN30 1099 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-205ENST00000527046 C16orf62Q7Z3J2 963 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 FGD2Q7Z6J4 655 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 ZNF619Q8N2I2 560 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 TMEM251Q8N6I4 163 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 RBM15BQ8NDT2 890 aaKnown RBP9.82□□□□□ -0.84
NEDD8-205ENST00000527046 FAM71CQ8NEG0 241 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 NFKBIDQ8NI38 313 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 ARSGQ96EG1 525 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 C5orf34Q96MH7 638 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 TTTY12Q9BZ98 90 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 RAD21L1Q9H4I0 556 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 ZDHHC11Q9H8X9 412 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-205ENST00000527046 ANAPC2Q9UJX6 822 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 FBXL2Q9UKC9 423 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 MRTO4Q9UKD2 239 aaKnown RBP9.82□□□□□ -0.84
NEDD8-205ENST00000527046 PACSIN3Q9UKS6 424 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 ABCG2Q9UNQ0 655 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 WDR45Q9Y484 360 aa9.82□□□□□ -0.84
NEDD8-205ENST00000527046 GPC6Q9Y625 555 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-205ENST00000527046 A0A0G2JPF8 293 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 PRORSD1PA6NEY8 169 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 SERINC4A6NH21 518 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 EVPLLA8MZ36 301 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 HNRNPCL2B2RXH8 293 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 HNRNPCL3B7ZW38 293 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 B8ZZF3 427 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 GNB5O14775 395 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 ZNHIT1O43257 154 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 SCO2O43819 266 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 SLC28A2O43868 658 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 HNRNPCL1O60812 293 aaKnown RBP9.81□□□□□ -0.84
NEDD8-205ENST00000527046 MFN2O95140 757 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 RASAL1O95294 804 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 HNRNPCL4P0DMR1 293 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 NR2F1P10589 423 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 ESRRAP11474 423 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-205ENST00000527046 KRT20P35900 424 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 GSK3BP49841 420 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 SLC7A2P52569 658 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 EEFSECP57772 596 aaKnown RBP9.81□□□□□ -0.84
NEDD8-205ENST00000527046 LIPEQ05469 1076 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 DMTNQ08495 405 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 ART3Q13508 389 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 CEACAM7Q14002 265 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 FGFBP1Q14512 234 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 GLIPR1L2Q4G1C9 344 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 FLYWCH1Q4VC44 716 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 GPAT3Q53EU6 434 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 CMPK2Q5EBM0 449 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 TBCELQ5QJ74 424 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 GCNT6Q5T4J0 391 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 ATAD3BQ5T9A4 648 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 PRAMEF8Q5VWM4 474 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 PRAMEF7Q5VXH5 474 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 CCDC80Q76M96 950 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 VRK2Q86Y07 508 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 PGAM4Q8N0Y7 254 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 CLIP4Q8N3C7 705 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 METTL25Q8N6Q8 603 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 GATSQ8NAP1 163 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 OR2M3Q8NG83 312 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 FAR1Q8WVX9 515 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 PMM1Q92871 262 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 SLX1AQ9BQ83 275 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 DOHHQ9BU89 302 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 OSBPL11Q9BXB4 747 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 HOXD1Q9GZZ0 328 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 ZFP64Q9NPA5 681 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 PLSCR2Q9NRY7 297 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 THUMPD1Q9NXG2 353 aaKnown RBP9.81□□□□□ -0.84
NEDD8-205ENST00000527046 MED11Q9P086 117 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 P2RX2Q9UBL9 471 aa9.81□□□□□ -0.84
NEDD8-205ENST00000527046 SUCOQ9UBS9 1254 aaKnown RBP9.81□□□□□ -0.84
NEDD8-205ENST00000527046 ICAM5Q9UMF0 924 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms