RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 PTPMT1Q8WUK0 201 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 RASSF5Q8WWW0 418 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 THAP4Q8WY91 577 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 LZICQ8WZA0 190 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 JADE3Q92613 823 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 HOXB13Q92826 284 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 FGF11Q92914 225 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 TMEM125Q96AQ2 219 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 ASB9Q96DX5 294 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 VMP1Q96GC9 406 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 SENP5Q96HI0 755 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 SLC35G5Q96KT7 338 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 LRGUKQ96M69 825 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 FER1L6-AS2Q96M78 137 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 ZNF583Q96ND8 569 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 WWC2-AS2Q96NR7 200 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 GNRHR2Q96P88 292 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 TRNT1Q96Q11 434 aaKnown RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 ZNF607Q96SK3 696 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 CPPED1Q9BRF8 314 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 LMF2Q9BU23 707 aaKnown RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 BTBD2Q9BX70 525 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 DPH1Q9BZG8 443 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 TRIM4Q9C037 500 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 SEMA4CQ9C0C4 833 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 HOXD1Q9GZZ0 328 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 ZNF700Q9H0M5 742 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 OR10A5Q9H207 317 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 PIGUQ9H490 435 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 ARMC7Q9H6L4 198 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 EPS8L2Q9H6S3 715 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 CXorf36Q9H7Y0 433 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 YY1AP1Q9H869 796 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 EVA1AQ9H8M9 152 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 GORASP2Q9H8Y8 452 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 MTHFD2LQ9H903 347 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 GPN2Q9H9Y4 310 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 BCL2L10Q9HD36 194 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 Q9N2J8 555 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 A4GALTQ9NPC4 353 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 ASCL3Q9NQ33 180 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 NECTIN3Q9NQS3 549 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 PNO1Q9NRX1 252 aaKnown RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 SIRT3Q9NTG7 399 aaPredicted RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 CMTM6Q9NX76 183 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 SLC25A37Q9NYZ2 338 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 MAT2BQ9NZL9 334 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 FOXJ2Q9P0K8 574 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 ACTR3BQ9P1U1 418 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 C5AR2Q9P296 337 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 P2RX2Q9UBL9 471 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 DKK4Q9UBT3 224 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 CD300AQ9UGN4 299 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 RPS6KA6Q9UK32 745 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 ANGPT4Q9Y264 503 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 NEUROG3Q9Y4Z2 214 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 CLDN16Q9Y5I7 305 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 SNX13Q9Y5W8 968 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.54□□□□□ -1.84
C11orf54-204ENST00000527003 RALGAPA1Q6GYQ0 2036 aa3.54□□□□□ -1.84
C11orf54-204ENST00000527003 AHCTF1Q8WYP5 2266 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 ADAMTS9Q9P2N4 1935 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 IGHV1-45A0A0A0MS14 117 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 NSG1A0A0A6YYJ2 146 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 A0A0G2JPF8 293 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 C2orf92A0A1B0GVN3 265 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 A0A1W2PNU3 283 aaPredicted RBP3.53□□□□□ -1.84
C11orf54-204ENST00000527003 FAM149AA5PLN7 773 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 PRORSD1PA6NEY8 169 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 TRABD2BA6NFA1 517 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 FRG2CA6NGY1 282 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 AQP12BA6NM10 295 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 HNRNPCL2B2RXH8 293 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 HNRNPCL3B7ZW38 293 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 H0YHG0 523 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 HMGN4O00479 90 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 NME4O00746 187 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 TO15178 435 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 STX11O75558 287 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 JRKO75564 520 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 CREG1O75629 220 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 NKX2-2O95096 273 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 DDAH2O95865 285 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 HPP00738 406 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 HMGN2P05204 90 aaKnown RBP3.53□□□□□ -1.84
C11orf54-204ENST00000527003 SERPINA7P05543 415 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 UMODP07911 640 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 TFPTP0C1Z6 253 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 HNRNPCL4P0DMR1 293 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 NR2F1P10589 423 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 ETS2P15036 469 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 CD1EP15812 388 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 GGT1P19440 569 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 EFNA1P20827 205 aaPredicted RBP3.53□□□□□ -1.84
C11orf54-204ENST00000527003 ATP6V1C1P21283 382 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 GABRA3P34903 492 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 DLSTP36957 453 aa3.53□□□□□ -1.84
C11orf54-204ENST00000527003 MAP3K8P41279 467 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms