RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 TXNL4AP83876 142 aaKnown RBP9.25□□□□□ -0.93
VPS28-204ENST00000526054 SNTA1Q13424 505 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 EXOSC6Q5RKV6 272 aaKnown RBP9.25□□□□□ -0.93
VPS28-204ENST00000526054 GKAP1Q5VSY0 366 aaPredicted RBP9.25□□□□□ -0.93
VPS28-204ENST00000526054 SAXO2Q658L1 398 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 SLC30A6Q6NXT4 461 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 TMEM81Q6P7N7 255 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 ANGPTL8Q6UXH0 198 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 ZNF621Q6ZSS3 439 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 TRILQ7L0X0 811 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 FUNDC1Q8IVP5 155 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 DMRTC2Q8IXT2 367 aaPredicted RBP9.25□□□□□ -0.93
VPS28-204ENST00000526054 CLEC4FQ8N1N0 589 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 PIK3R3Q92569 461 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 CDS1Q92903 461 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 NEURL3Q96EH8 262 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 OTUB1Q96FW1 271 aaPredicted RBP9.25□□□□□ -0.93
VPS28-204ENST00000526054 ZNF597Q96LX8 424 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 OR7D2Q96RA2 312 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 ELAC2Q9BQ52 826 aaKnown RBP9.25□□□□□ -0.93
VPS28-204ENST00000526054 TTYH2Q9BSA4 534 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 DOHHQ9BU89 302 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 G6PC3Q9BUM1 346 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 BTBD2Q9BX70 525 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 OSBPL11Q9BXB4 747 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 LDAHQ9H6V9 325 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 EXO5Q9H790 373 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 SLC24A3Q9HC58 644 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 SERHLQ9NQF3 203 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 TUBA8Q9NY65 449 aaPredicted RBP9.25□□□□□ -0.93
VPS28-204ENST00000526054 TNFRSF10DQ9UBN6 386 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 B4GALT7Q9UBV7 327 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 KCNN3Q9UGI6 736 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 FAM215AQ9Y5M1 114 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.25□□□□□ -0.93
VPS28-204ENST00000526054 SPG11Q96JI7 2443 aa9.25□□□□□ -0.93
VPS28-204ENST00000526054 ZNF469Q96JG9 3925 aaPredicted RBP9.25□□□□□ -0.93
VPS28-204ENST00000526054 A0A096LPI6 279 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 A0A1B0GVC2 190 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 A0A1W2PP18 115 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 ANGPT2O15123 496 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 CCDC22O60826 627 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 WDR1O75083 606 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 GSNP06396 782 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 HOXD4P09016 255 aaPredicted RBP9.24□□□□□ -0.93
VPS28-204ENST00000526054 ZCCHC18P0CG32 403 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 GLI4P10075 376 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 CYP4B1P13584 511 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 CD1EP15812 388 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 ATP6V1C1P21283 382 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 ADSLP30566 484 aaPredicted RBP9.24□□□□□ -0.93
VPS28-204ENST00000526054 LCN1P31025 176 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 CASP3P42574 277 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 CDKN2CP42773 168 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 MAGEA8P43361 318 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 CLK3P49761 638 aaKnown RBP9.24□□□□□ -0.93
VPS28-204ENST00000526054 RPS26P62854 115 aaKnown RBP9.24□□□□□ -0.93
VPS28-204ENST00000526054 FOXO1Q12778 655 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 MAPRE2Q15555 327 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.24□□□□□ -0.93
VPS28-204ENST00000526054 HYAL4Q2M3T9 481 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 ATAD3BQ5T9A4 648 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 WLSQ5T9L3 541 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 FIGNL1Q6PIW4 674 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 SLC2A7Q6PXP3 512 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 PACS2Q86VP3 889 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 OR5D16Q8NGK9 328 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 MIPOL1Q8TD10 442 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 TSPEARQ8WU66 669 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 GTF2H4Q92759 462 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 SARAFQ96BY9 339 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 DTNBP1Q96EV8 351 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 JSRP1Q96MG2 331 aaPredicted RBP9.24□□□□□ -0.93
VPS28-204ENST00000526054 NODALQ96S42 347 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 ANGPTL4Q9BY76 406 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 OR51I1Q9H343 314 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 RAD21L1Q9H4I0 556 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 ZNF703Q9H7S9 590 aaPredicted RBP9.24□□□□□ -0.93
VPS28-204ENST00000526054 SAR1AQ9NR31 198 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 EXD2Q9NVH0 621 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 LEF1Q9UJU2 399 aaPredicted RBP9.24□□□□□ -0.93
VPS28-204ENST00000526054 ACAD8Q9UKU7 415 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 ABCG2Q9UNQ0 655 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 CAPN7Q9Y6W3 813 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 NCKAP5O14513 1909 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 ARHGAP21Q5T5U3 1957 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 ITPR3Q14573 2671 aa9.24□□□□□ -0.93
VPS28-204ENST00000526054 AKAP6Q13023 2319 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 TRGV5A0A0B4J1U4 118 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 A0A0G2JNJ9 132 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 SLC22A2O15244 555 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 SUSD5O60279 629 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 SNX3O60493 162 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 ICOSLGO75144 302 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 KCNK2O95069 426 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 UTS2O95399 124 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 PPIBP23284 216 aaKnown RBP9.23□□□□□ -0.93
VPS28-204ENST00000526054 EVI2BP34910 448 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 ART1P52961 327 aa9.23□□□□□ -0.93
VPS28-204ENST00000526054 HPCAP84074 193 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms