RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 F8VP50 259 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 G3V2L1 256 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 SYT7O43581 403 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 TLX2O43763 284 aaPredicted RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 FGF19O95750 216 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 PNMA6AP0CW24 399 aaPredicted RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 HMGA1P17096 107 aaKnown RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 FCARP24071 287 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 ANXA13P27216 316 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 GABRR2P28476 465 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 STIP1P31948 543 aaKnown RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 FCGR2BP31994 310 aaPredicted RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 FCGR2CP31995 323 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 TUFMP49411 452 aaKnown RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 KLK7P49862 253 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 SERPINH1P50454 418 aaKnown RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 YWHAEP62258 255 aaKnown RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 RPL10AP62906 217 aaKnown RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 SRPXP78539 464 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 DMTNQ08495 405 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 HTR4Q13639 388 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 MORF4L2Q15014 288 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 ZNF146Q15072 292 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 KRT31Q15323 416 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 MLF2Q15773 248 aaPredicted RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 EXOC3L4Q17RC7 722 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 GOLGA7BQ2TAP0 167 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 TMEM270Q6UE05 265 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 CLEC20AQ6ZU45 233 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 TMEM150AQ86TG1 271 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 ASPGQ86U10 573 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 ITIH5Q86UX2 942 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 LUZP1Q86V48 1076 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 NLRP14Q86W24 1093 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 KCNMB4Q86W47 210 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 C12orf29Q8N999 325 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 LEMD2Q8NC56 503 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 CCDC197Q8NCU1 140 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 OR2L2Q8NH16 312 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 ING5Q8WYH8 240 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 PRCCQ92733 491 aaPredicted RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 FGF13Q92913 245 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 SMARCD1Q96GM5 515 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 ZNF597Q96LX8 424 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 ATOH8Q96SQ7 321 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 KCNK16Q96T55 309 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 CRACR2AQ9BSW2 395 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 MED10Q9BTT4 135 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 NAT10Q9H0A0 1025 aaKnown RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 GANQ9H2C0 597 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 FAM124BQ9H5Z6 455 aaPredicted RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 HEXA-AS1Q9H8Q6 139 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 MARCH7Q9H992 704 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 WDR41Q9HAD4 459 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 CSNK1G1Q9HCP0 422 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 DMAP1Q9NPF5 467 aaPredicted RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 ACP6Q9NPH0 428 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 GTSE1Q9NYZ3 720 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 EPS15L1Q9UBC2 864 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 TEKT2Q9UIF3 430 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 DNAJC12Q9UKB3 198 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 TSPAN16Q9UKR8 245 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 MRPS18CQ9Y3D5 142 aaKnown RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 HELZP42694 1942 aaKnown RBP3.18□□□□□ -1.9
CD44-219ENST00000525685 GREB1Q4ZG55 1949 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 SZT2Q5T011 3432 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 CDH23Q9H251 3354 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 ATP8B3O60423 1300 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 DENND4CQ5VZ89 1909 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 DOCK8Q8NF50 2099 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 REV3LO60673 3130 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 A0A0A6YYC8 382 aaPredicted RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 FAM92AA1XBS5 289 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 A8MU76 341 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 ANHXE9PGG2 379 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 NEDD8-MDP1E9PL57 170 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 F8VZ95 297 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 I3L1I5 382 aaPredicted RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 M0QYV0 167 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 RNF103O00237 685 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 PES1O00541 588 aaKnown RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 ATP6V1G1O75348 118 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 NXPH4O95158 308 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 PRAMEF12O95522 483 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 ANGPTL1O95841 491 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 OLFM2O95897 454 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 TPM2P07951 284 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 PAEPP09466 180 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 ACADSP16219 412 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 VCLP18206 1134 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 SMSP52788 366 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 NDUFV3P56181 108 aaKnown RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 MAP3K7CLP57077 242 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 SLC8A3P57103 927 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 PAX8Q06710 450 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 IFT88Q13099 833 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 GPR50Q13585 617 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 TRADDQ15628 312 aa3.17□□□□□ -1.9
CD44-219ENST00000525685 CCDC92Q53HC0 331 aaPredicted RBP3.17□□□□□ -1.9
CD44-219ENST00000525685 FAM78AQ5JUQ0 283 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms