RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CBWD2Q8IUF1 395 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 PSTKQ8IV42 348 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 DND1Q8IYX4 353 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 SYCP3Q8IZU3 236 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 LGI2Q8N0V4 545 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 NDUFAF2Q8N183 169 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 C12orf29Q8N999 325 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 Q8N9G6 341 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 ZFP62Q8NB50 900 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 SIDT2Q8NBJ9 832 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 SLC4A11Q8NBS3 891 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 MDS2Q8NDY4 140 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 FBXL13Q8NEE6 735 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 C17orf47Q8NEP4 570 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 OR5AP2Q8NGF4 316 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 OR4C3Q8NH37 302 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 BRSK1Q8TDC3 778 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 AGAP11Q8TF27 550 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 HEXDCQ8WVB3 486 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 DYRK2Q92630 601 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 RNASE6Q93091 150 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 TRIM63Q969Q1 353 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 NUS1Q96E22 293 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 C8orf76Q96K31 380 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 LINC00615Q96LM1 132 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 JAKMIP1Q96N16 626 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 RPRD1AQ96P16 312 aaPredicted RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 VPS35Q96QK1 796 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 PSKH2Q96QS6 385 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ZSCAN5AQ9BUG6 496 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 C19orf24Q9BVV8 132 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 RAB11FIP5Q9BXF6 653 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 LRRC2Q9BYS8 371 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ULBP1Q9BZM6 244 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 FAM129AQ9BZQ8 928 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ZYG11BQ9C0D3 744 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 PAIP1Q9H074 479 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 SDCBP2Q9H190 292 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 KIR3DX1Q9H7L2 352 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 SYNDIG1Q9H7V2 258 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 ZDHHC11Q9H8X9 412 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 APMAPQ9HDC9 416 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.34□□□□□ -2.19
CD44-212ENST00000524922 CISHQ9NSE2 258 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 SMOXQ9NWM0 555 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 GPATCH2LQ9NWQ4 482 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 QPCTLQ9NXS2 382 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 UTP6Q9NYH9 597 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 TAS2R14Q9NYV8 317 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 FLRT3Q9NZU0 649 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 MTRF1LQ9UGC7 380 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 LIMA1Q9UHB6 759 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 TSPAN16Q9UKR8 245 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 POMT2Q9UKY4 750 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 HPCAL4Q9UM19 191 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 NEU3Q9UQ49 428 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 CA5BQ9Y2D0 317 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 LYVE1Q9Y5Y7 322 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 HEBP2Q9Y5Z4 205 aa1.34□□□□□ -2.19
CD44-212ENST00000524922 MRPS18BQ9Y676 258 aaKnown RBP1.34□□□□□ -2.19
CD44-212ENST00000524922 TENM2Q9NT68 2774 aa1.34□□□□□ -2.2
CD44-212ENST00000524922 LYSTQ99698 3801 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CMYA5Q8N3K9 4069 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 DYNC2H1Q8NCM8 4307 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 DNAH3Q8TD57 4116 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 TCHHQ07283 1943 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 A0A1B0GUS0 222 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 A0A1B0GX78 115 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 HYKKA2RU49 373 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 GTPBP10A4D1E9 387 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 C2orf81A6NN90 581 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 USP27XA6NNY8 438 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 MPTX1A8MV57 137 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 A8MV72 311 aaPredicted RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 KLRC4-KLRK1H3BQV0 150 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 NDUFS8O00217 210 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 RASGRF2O14827 1237 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 KMOO15229 486 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 TTI1O43156 1089 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 NME2P1O60361 137 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 OR10H2O60403 315 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 UGT1A9O60656 530 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SRPX2O60687 465 aaPredicted RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 PRAMEF11O60813 436 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SMPD2O60906 423 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SLC25A12O75746 678 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SLCO2B1O94956 709 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 VENTXO95231 258 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 IPO7O95373 1038 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 LSM8O95777 96 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 UGT2B4P06133 528 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CENPBP07199 599 aaPredicted RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 DLATP10515 647 aaKnown RBP1.33□□□□□ -2.2
CD44-212ENST00000524922 PRG2P13727 222 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 SLC25A16P16260 332 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 ZNF24P17028 368 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 HNF1AP20823 631 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 CYP2A7P20853 494 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 ADORA2BP29275 332 aa1.33□□□□□ -2.2
CD44-212ENST00000524922 OR1E1P30953 314 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms