RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	EPO	P01588	193 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	TRBC1	P01850	177 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	APOA1	P02647	267 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	OPN1LW	P04000	364 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	F7	P08709	466 aa	Predicted RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	CT45A8	P0DMV1	189 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	CT45A9	P0DMV2	189 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	ANPEP	P15144	967 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	AMD1	P17707	334 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	NT5E	P21589	574 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	MSR1	P21757	451 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	MNDA	P41218	407 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	HTR2B	P41595	481 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	ALDH3B1	P43353	468 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	PLTP	P55058	493 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	CDH4	P55283	916 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	BDH1	Q02338	343 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	EEF1A2	Q05639	463 aa	Known RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	ST3GAL1	Q11201	340 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	MYBPH	Q13203	477 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	NME3	Q13232	169 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	XRCC4	Q13426	336 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	EXOSC2	Q13868	293 aa	Known RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	TMEM132D	Q14C87	1099 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	CTF1	Q16619	201 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	ZNF284	Q2VY69	593 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	HNRNPA1L2	Q32P51	320 aa	Known RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	DCAF4L1	Q3SXM0	396 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	CT45A2	Q5DJT8	189 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	OR7E24	Q6IFN5	339 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	LINGO4	Q6UY18	593 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	VTCN1	Q7Z7D3	282 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	LUZP2	Q86TE4	346 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	NKAIN4	Q8IVV8	208 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	CHERP	Q8IWX8	916 aa	Known RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	EFCAB13	Q8IY85	973 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	TMEM123	Q8N131	208 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	KLHDC1	Q8N7A1	406 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	MAB21L3	Q8N8X9	362 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	COLGALT1	Q8NBJ5	622 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	ADAD2	Q8NCV1	583 aa	Known RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	VN1R2	Q8NFZ6	395 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	THAP6	Q8TBB0	222 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	LKAAEAR1	Q8TD35	194 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	GRHL3	Q8TE85	626 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	DDI1	Q8WTU0	396 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	GLYATL2	Q8WU03	294 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	CCDC107	Q8WV48	283 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	VSTM2L	Q96N03	204 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	INPP4A	Q96PE3	977 aa	Predicted RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	OR1F2P	Q96R84	312 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	C19orf43	Q9BQ61	176 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	WDR77	Q9BQA1	342 aa	Predicted RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	TRIM62	Q9BVG3	475 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	POLDIP3	Q9BY77	421 aa	Known RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	STRADB	Q9C0K7	418 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	SLC26A1	Q9H2B4	701 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	GEMIN7	Q9H840	131 aa	Known RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	C10orf88	Q9H8K7	445 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	MAP6D1	Q9H9H5	199 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	SLC38A10	Q9HBR0	1119 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	ZNF160	Q9HCG1	818 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	TREM1	Q9NP99	234 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	CHRAC1	Q9NRG0	131 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	PIPOX	Q9P0Z9	390 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	LHX3	Q9UBR4	397 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	PILRA	Q9UKJ1	303 aa		3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	ZNF346	Q9UL40	294 aa	Known RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	BARX2	Q9UMQ3	279 aa	Predicted RBP	3.81	□□□□□ -1.8
PCM1-223	ENST00000524356	PTPRC	P08575	1304 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	COL11A1	P12107	1806 aa	Predicted RBP	3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	TRBV5-3	A0A0A0MS03	114 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	SRRM4	A7MD48	611 aa	Known RBP	3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	HAS3	O00219	553 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	CHEK1	O14757	476 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	ARPC2	O15144	300 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	NBR2	O15453	112 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	CHMP2A	O43633	222 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	TIMM8A	O60220	97 aa	Predicted RBP	3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	JAK2	O60674	1132 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	CLN5	O75503	358 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	GRAP2	O75791	330 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	TXNDC12	O95881	172 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	HPR	P00739	348 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	ANXA4	P09525	319 aa	Predicted RBP	3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	STAG3L2	P0CL84	134 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	NCK1	P16333	377 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	CHRNB2	P17787	502 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	SRM	P19623	302 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	PTN	P21246	168 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	LAP3	P28838	519 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	MAGEA8	P43361	318 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	NPY2R	P49146	381 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	TPMT	P51580	245 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	MAZ	P56270	477 aa	Known RBP	3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	CX3CL1	P78423	397 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	OTUD4	Q01804	1114 aa	Known RBP	3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	SIGLEC14	Q08ET2	396 aa		3.8	□□□□□ -1.8
PCM1-223	ENST00000524356	CTTN	Q14247	550 aa	Known RBP	3.8	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms