RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 SAMD8Q96LT4 415 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 DPH1Q9BZG8 443 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 PLEK2Q9NYT0 353 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 ABRACLQ9P1F3 81 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 KLHL13Q9P2N7 655 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 PADI1Q9ULC6 663 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 MAGED1Q9Y5V3 778 aaPredicted RBP15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 M0R3H8 397 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 STSP08842 583 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 RAC2P15153 192 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 OGFRL1Q5TC84 451 aaPredicted RBP15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 SLC2A12Q8TD20 617 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 SCGB1C1Q8TD33 95 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 SLC25A44Q96H78 314 aaPredicted RBP15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 INPP5KQ9BT40 448 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 ADAMTS6Q9UKP5 1117 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 STUB1Q9UNE7 303 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 RAB38P57729 211 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 DUSP6Q16828 381 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 ZNF423Q2M1K9 1284 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 CNTN4Q8IWV2 1026 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 POGLUT1Q8NBL1 392 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 TRUB1Q8WWH5 349 aaKnown RBP15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 LGALS12Q96DT0 336 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 MACROD1Q9BQ69 325 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 ZNF350Q9GZX5 532 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 SOX17Q9H6I2 414 aaPredicted RBP15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 LPLP06858 475 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 MYOGP15173 224 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 UGT2B7P16662 529 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 IL32P24001 234 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 RPS26P11Q5JNZ5 115 aaPredicted RBP15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 UGT2A3Q6UWM9 527 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 OR51Q1Q8NH59 317 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 SLC22A12Q96S37 553 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 ACPTQ9BZG2 426 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 ACOT13Q9NPJ3 140 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 INIPQ9NRY2 104 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 C1GALT1Q9NS00 363 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 FGF21Q9NSA1 209 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 DNAJB11Q9UBS4 358 aa15.29■□□□□ 0.04
PCDHA3-201ENST00000522353 BORCS7-ASMTA0A0B4J1R7 106 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 ANKRD30BLA7E2S9 258 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 EIF2S3P41091 472 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 MGAT3Q09327 533 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 PIN1Q13526 163 aaPredicted RBP15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 CDNFQ49AH0 187 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 IL20RBQ6UXL0 311 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 OR5L1Q8NGL2 311 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 OR5AK2Q8NH90 309 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 SLC6A16Q9GZN6 736 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 ACSS1Q9NUB1 689 aaPredicted RBP15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 PCBD1P61457 104 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 ZXDBP98169 803 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 GTDC1Q4AE62 458 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 MMP21Q8N119 569 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 MYLIPQ8WY64 445 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 ZC3H10Q96K80 434 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 SLC6A7Q99884 636 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 SORBS1Q9BX66 1292 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 PCDHB10Q9UN67 800 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 CAMK2AQ9UQM7 478 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 ATXN1LP0C7T5 689 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 CPOXP36551 454 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 SMAD4Q13485 552 aaKnown RBP15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 GRAMD2AQ8IUY3 354 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 ZFPM2Q8WW38 1151 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 CDS1Q92903 461 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 TRIM43Q96BQ3 446 aaPredicted RBP15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 TRAV6A0A075B6T7 132 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 TSPAN4O14817 238 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 CAPN3P20807 821 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 PSMB5P28074 263 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 SLC26A5P58743 744 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 BDH1Q02338 343 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 ZNF181Q2M3W8 571 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 WBP2NLQ6ICG8 309 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 TRIM46Q7Z4K8 759 aa15.28■□□□□ 0.04
PCDHA3-201ENST00000522353 F5H5K5 113 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 LSM1O15116 133 aaKnown RBP15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 PTHP01270 115 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 CSF2P04141 144 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 MMP12P39900 470 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 MAP2K3P46734 347 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 C22orf42Q6IC83 251 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 SERPINA11Q86U17 422 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 DYNLRB1Q9NP97 96 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 SLC6A5Q9Y345 797 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 HSPB11Q9Y547 144 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 CNTRLQ7Z7A1 2325 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 TLCD2A6NGC4 264 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 CLCA1A8K7I4 914 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 HOXC11O43248 304 aaPredicted RBP15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 EEF1E1O43324 174 aaKnown RBP15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 SLC5A2P31639 672 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 IRS1P35568 1242 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 ART1P52961 327 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 PSPHP78330 225 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 EIF2B1Q14232 305 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms