RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SRPX2O60687 465 aaPredicted RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 MTX2O75431 263 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 KIAA0754O94854 1291 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 SNX4O95219 450 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ADCY5O95622 1261 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 UMPSP11172 480 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ANXA3P12429 323 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 PCMT1P22061 227 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 MFAP2P55001 183 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 NOP14P78316 857 aaKnown RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ACY1Q03154 408 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 CSTF1Q05048 431 aaKnown RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ELAVL2Q12926 359 aaKnown RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 C1orf61Q13536 156 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ATXN7L3Q14CW9 347 aaPredicted RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 FCN2Q15485 313 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 CCDC57Q2TAC2 916 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 SNAI3Q3KNW1 292 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 FAM74A3Q4VXF1 159 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ATF7IP2Q5U623 682 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 WSCD1Q658N2 575 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 SEL1L3Q68CR1 1132 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 PVRIGQ6DKI7 326 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ADAM5Q6NVV9 412 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 EMBQ6PCB8 327 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF497Q6ZNH5 498 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 Q6ZTC4 211 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 RNF130Q86XS8 419 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF683Q8IZ20 524 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 SLC38A6Q8IZM9 456 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 MAPK1IP1LQ8NDC0 245 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 CATSPER1Q8NEC5 780 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 C17orf47Q8NEP4 570 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR8J1Q8NGP2 316 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 PNPT1Q8TCS8 783 aaKnown RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ADAMTS16Q8TE57 1224 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 NPRL2Q8WTW4 380 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 NT5C3BQ969T7 300 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 PELI1Q96FA3 418 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 C18orf12Q96KH6 178 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 OMDQ99983 421 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 GFRA4Q9GZZ7 299 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 MAGT1Q9H0U3 335 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 APMAPQ9HDC9 416 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 RAB18Q9NP72 206 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 SMOXQ9NWM0 555 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 FAM120CQ9NX05 1096 aaKnown RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 PIPOXQ9P0Z9 390 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 WRAP73Q9P2S5 460 aaPredicted RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 GALPQ9UBC7 116 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 SNX6Q9UNH7 406 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 RABL2BQ9UNT1 228 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 RNF24Q9Y225 148 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 MRPL11Q9Y3B7 192 aaKnown RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR10H1Q9Y4A9 318 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 KIAA0586Q9BVV6 1533 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 TONSLQ96HA7 1378 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 MADDQ8WXG6 1647 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ABCC10Q5T3U5 1492 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 MAGI2Q86UL8 1455 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 GRIN2DO15399 1336 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 SPATA31E1Q6ZUB1 1445 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 PRDM15P57071 1507 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF608Q9ULD9 1512 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 GSAPA4D1B5 854 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 A8MUI8 341 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 A8MXK9 166 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 PDHXO00330 501 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 CASKO14936 926 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 PI15O43692 258 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 GMFGO60234 142 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 POP4O95707 220 aaKnown RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 F10P00742 488 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 IL1BP01584 269 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 BCKDHAP12694 445 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 DPEP1P16444 411 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 PGCP20142 388 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 CDH5P33151 784 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 SPRP35270 261 aaPredicted RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 RGS19P49795 217 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 RPS14P62263 151 aaKnown RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 RPL8P62917 257 aaKnown RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 IL9RQ01113 521 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 LRRC74AQ0VAA2 488 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 COX10Q12887 443 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 RIPK1Q13546 671 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 TGIF1Q15583 401 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 SLC5A12Q1EHB4 618 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 C14orf28Q4W4Y0 310 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF506Q5JVG8 444 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 ARMCX5Q6P1M9 558 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 APOOLQ6UXV4 268 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 TSEN54Q7Z6J9 526 aaKnown RBP2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 VSTM4Q8IW00 320 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR9A4Q8NGU2 314 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 AKR1E2Q96JD6 320 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 CNDP1Q96KN2 507 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF597Q96LX8 424 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF599Q96NL3 588 aa2.7□□□□□ -1.98
HMGN1P28-201ENST00000521340 RANBP9Q96S59 729 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms