RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 ARMC6Q6NXE6 501 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 SPNS3Q6ZMD2 512 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 DEF8Q6ZN54 512 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 USP30Q70CQ3 517 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 TPRA1Q86W33 373 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 LRRC28Q86X40 367 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 CIR1Q86X95 450 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 XYLT1Q86Y38 959 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 SLC41A1Q8IVJ1 513 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 GID4Q8IVV7 300 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 CFAP206Q8IYR0 622 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 ARL14Q8N4G2 192 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 WDTC1Q8N5D0 677 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 ADPRHL1Q8NDY3 354 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 PPHLN1Q8NEY8 458 aaKnown RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 B3GNT7Q8NFL0 401 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 ZNF384Q8TF68 577 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 SMAP2Q8WU79 429 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 LCN9Q8WX39 176 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 CNOT9Q92600 299 aaKnown RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 TFGQ92734 400 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 DDX17Q92841 729 aaKnown RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 C3orf49Q96BT1 292 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 RRNAD1Q96FB5 475 aaKnown RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 ZNF385AQ96PM9 386 aaKnown RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 DDOQ99489 341 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 PKP4Q99569 1192 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 THAP7Q9BT49 309 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 PI4K2AQ9BTU6 479 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 CPVLQ9H3G5 476 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 FAM124BQ9H5Z6 455 aaPredicted RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 BCAS3Q9H6U6 928 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 SLC25A19Q9HC21 320 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 FZD3Q9NPG1 666 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 MED17Q9NVC6 651 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 GPR83Q9NYM4 423 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 ZNF226Q9NYT6 803 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 COX16Q9P0S2 106 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 HACL1Q9UJ83 578 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 EXO1Q9UQ84 846 aaKnown RBP8.08□□□□□ -1.12
SHPRH-208ENST00000520752 PLEKHM1Q9Y4G2 1056 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 PHLPP1O60346 1717 aa8.08□□□□□ -1.12
SHPRH-208ENST00000520752 CITO14578 2027 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 IGKV6D-41A0A0C4DH26 115 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 TRDV1A0A1B0GX56 115 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 LNP1A1A4G5 178 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 URADA6NGE7 173 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 TRDCB7Z8K6 153 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 PRR23D1E9PI22 279 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-208ENST00000520752 FAM86B1E9PN63 330 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 GFYI3L273 518 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 GTPBP1O00178 669 aaKnown RBP8.07□□□□□ -1.12
SHPRH-208ENST00000520752 TSPAN2O60636 221 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 FZD7O75084 574 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 CXCL14O95715 111 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 IFNA17P01571 189 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 SEMG1P04279 462 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 AMY2AP04746 511 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 THP07101 528 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 IQCF3P0C7M6 154 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 OR8U8P0C7N1 319 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 STAG3L1P0CL83 205 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 PRR23D2P0DMB1 279 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-208ENST00000520752 C1GALT1C1LP0DN25 315 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 ZNF44P15621 663 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 ZNF14P17017 642 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-208ENST00000520752 ERCC2P18074 760 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 AMY2BP19961 511 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 CYP2F1P24903 491 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 VIPR1P32241 457 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 BTCP35070 178 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 STAT5AP42229 794 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 CDX1P47902 265 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-208ENST00000520752 GATMP50440 423 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 CCR4P51679 360 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 SNRPGP62308 76 aaKnown RBP8.07□□□□□ -1.12
SHPRH-208ENST00000520752 SHC2P98077 582 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 IL10RBQ08334 325 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 TPBGQ13641 420 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 DPYSL2Q16555 572 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 HAGHQ16775 308 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 XKR7Q5GH72 579 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 ELFN2Q5R3F8 820 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 TMEM244Q5VVB8 128 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 FAM199XQ6PEV8 388 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-208ENST00000520752 TMEM88Q6PEY1 159 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 ALKAL2Q6UX46 152 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 B3GNT9Q6UX72 402 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 ZNF783Q6ZMS7 281 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 QSOX2Q6ZRP7 698 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 PDZD4Q76G19 769 aaPredicted RBP8.07□□□□□ -1.12
SHPRH-208ENST00000520752 FAM86B1Q8N7N1 296 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 OR56A3Q8NH54 315 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 OR5R1Q8NH85 324 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 SH3RF2Q8TEC5 729 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 TMEM203Q969S6 136 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 TADA1Q96BN2 335 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 S100PBPQ96BU1 408 aa8.07□□□□□ -1.12
SHPRH-208ENST00000520752 MTFMTQ96DP5 389 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms