RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RBM28Q9NW13 759 aaKnown RBP4.21□□□□□ -1.74
PTPN12-213ENST00000519553 ATXN10Q9UBB4 475 aa4.21□□□□□ -1.74
PTPN12-213ENST00000519553 AP4B1Q9Y6B7 739 aa4.21□□□□□ -1.74
PTPN12-213ENST00000519553 EFNA2O43921 213 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 STSP08842 583 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 PSMB1P20618 241 aaKnown RBP4.2□□□□□ -1.74
PTPN12-213ENST00000519553 MAPK3P27361 379 aaPredicted RBP4.2□□□□□ -1.74
PTPN12-213ENST00000519553 OR3A4PP47883 348 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 TRPC1P48995 793 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 VLDLRP98155 873 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 HSF2Q03933 536 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 METTL11BQ5VVY1 283 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 ERASQ7Z444 233 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 LHFPL4Q7Z7J7 247 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 CBWD2Q8IUF1 395 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 OR2T33Q8NG76 320 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 OR5AU1Q8NGC0 362 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 HAVCR1Q96D42 359 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 CYYR1Q96J86 154 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 COG4Q9H9E3 785 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 VAT1LQ9HCJ6 419 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 AGPAT5Q9NUQ2 364 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 SAMD4AQ9UPU9 718 aaKnown RBP4.2□□□□□ -1.74
PTPN12-213ENST00000519553 MGAT4BQ9UQ53 548 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 RNF6Q9Y252 685 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 NCAPD2Q15021 1401 aa4.2□□□□□ -1.74
PTPN12-213ENST00000519553 TNRQ92752 1358 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 ANKRD30BQ9BXX2 1392 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 FAM231BA6NCW3 169 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 STX11O75558 287 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 CABYRO75952 493 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 CCND2P30279 289 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 ADRA1AP35348 466 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 PTGFRP43088 359 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 GMFBP60983 142 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 LINC01620Q4KN68 170 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 SCARA5Q6ZMJ2 495 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 TRPM8Q7Z2W7 1104 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 MISPQ8IVT2 679 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 GIPC3Q8TF64 312 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 C16orf74Q96GX8 76 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 VPS39Q96JC1 886 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 CCSER1Q9C0I3 900 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 ECT2Q9H8V3 914 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 ISG20L2Q9H9L3 353 aaKnown RBP4.19□□□□□ -1.74
PTPN12-213ENST00000519553 CYTH4Q9UIA0 394 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 ODF2LQ9ULJ1 636 aa4.19□□□□□ -1.74
PTPN12-213ENST00000519553 MTF2Q9Y483 593 aaPredicted RBP4.19□□□□□ -1.74
PTPN12-213ENST00000519553 TDRD6O60522 2096 aaKnown RBP4.18□□□□□ -1.74
PTPN12-213ENST00000519553 CHADO15335 359 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 VPS26AO75436 327 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 GPX5O75715 221 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 KRT6AP02538 564 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 KRT6BP04259 564 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 THRBP10828 461 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 ARF4P18085 180 aaPredicted RBP4.18□□□□□ -1.74
PTPN12-213ENST00000519553 DPP4P27487 766 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 DRD3P35462 400 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 KRT6CP48668 564 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 OTUD4Q01804 1114 aaKnown RBP4.18□□□□□ -1.74
PTPN12-213ENST00000519553 OC90Q02509 493 aaPredicted RBP4.18□□□□□ -1.74
PTPN12-213ENST00000519553 CHI3L2Q15782 390 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 OR5M10Q6IEU7 315 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 LANCL3Q6ZV70 420 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 SLC34A3Q8N130 599 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 ZSCAN4Q8NAM6 433 aaPredicted RBP4.18□□□□□ -1.74
PTPN12-213ENST00000519553 M1APQ8TC57 530 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 SELENOMQ8WWX9 145 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 EHD1Q9H4M9 534 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 B9D1Q9UPM9 204 aa4.18□□□□□ -1.74
PTPN12-213ENST00000519553 LRRK1Q38SD2 2015 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 ESYT2A0FGR8 921 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 FAM74A7A6NL05 159 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 DHRS7CA6NNS2 312 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 F8WDY8 70 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 SDHDO14521 159 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 DUX1O43812 170 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 STAM2O75886 525 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 CHRNA1P02708 482 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 CPN1P15169 458 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 PAICSP22234 425 aaKnown RBP4.17□□□□□ -1.74
PTPN12-213ENST00000519553 AXLP30530 894 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 GNPDA1P46926 289 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 RPS8P62241 208 aaKnown RBP4.17□□□□□ -1.74
PTPN12-213ENST00000519553 BCL2L1Q07817 233 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 FAM74A3Q4VXF1 159 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 C2orf83Q53S99 150 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 SPATA46Q5T0L3 261 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 UNC5DQ6UXZ4 953 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 FRA10AC1Q70Z53 315 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 CATSPER4Q7RTX7 472 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 ANKRD37Q7Z713 158 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 TGIF2LYQ8IUE0 185 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 OR10H4Q8NGA5 316 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 HPDLQ96IR7 371 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 VPS35Q96QK1 796 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 PLEKHF1Q96S99 279 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 SLC30A2Q9BRI3 323 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 CAB39LQ9H9S4 337 aa4.17□□□□□ -1.74
PTPN12-213ENST00000519553 POLD4Q9HCU8 107 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms