RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 WDR53Q7Z5U6 358 aaPredicted RBP8□□□□□ -1.13
PCM1-212ENST00000519253 POMGNT2Q8NAT1 580 aa8□□□□□ -1.13
PCM1-212ENST00000519253 OR5D16Q8NGK9 328 aa8□□□□□ -1.13
PCM1-212ENST00000519253 UCN3Q969E3 161 aa8□□□□□ -1.13
PCM1-212ENST00000519253 DPEP2Q9H4A9 486 aa8□□□□□ -1.13
PCM1-212ENST00000519253 A0A0A6YYJ9 748 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 TRABD2BA6NFA1 517 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 GLTPD2A6NH11 291 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 SLC9B1P1A6NJY1 282 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 NPIPB8E9PQR5 432 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 SLC25A12O75746 678 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 CXCL14O95715 111 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 RAB40ALP0C0E4 278 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 NPR2P20594 1047 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 AHRP35869 848 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ACTBP60709 375 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ACTG1P63261 375 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ZNF322Q6U7Q0 402 aaPredicted RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 ZNF627Q7L945 461 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 HSD11B1LQ7Z5J1 315 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 TMPRSS12Q86WS5 348 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 CHST14Q8NCH0 376 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 OR4K14Q8NGD5 310 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 OR5J2Q8NH18 312 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 CYB5D2Q8WUJ1 264 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 RAB40AQ8WXH6 277 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ZC3HAV1LQ96H79 300 aaKnown RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 ZNF416Q9BWM5 594 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 SLC25A19Q9HC21 320 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 AK6Q9Y3D8 172 aaKnown RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 ANTXRLA6NF34 631 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 NAA10P41227 235 aaPredicted RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 TGM4P49221 684 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 GDI2P50395 445 aaKnown RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 POU6F2P78424 691 aaPredicted RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 TNK1Q13470 666 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 PUM1Q14671 1186 aaKnown RBP eCLIP7.99□□□□□ -1.131e-11■■■□□ 14.9
PCM1-212ENST00000519253 SLC8B1Q6J4K2 584 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 CCDC71Q8IV32 467 aaPredicted RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 ZCCHC10Q8TBK6 192 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 THAP4Q8WY91 577 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 TRMT2BQ96GJ1 504 aaKnown RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 SORBS1Q9BX66 1292 aaKnown RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 MEMO1Q9Y316 297 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 PPM1BO75688 479 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 PROS1P07225 676 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 CSF1P09603 554 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 C1SP09871 688 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 NDUFS1P28331 727 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 PXNP49023 591 aaPredicted RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 CCR9P51686 369 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 EXOSC2Q13868 293 aaKnown RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 ACSM5Q6NUN0 579 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ZER1Q7Z7L7 766 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 BPHLQ86WA6 291 aaPredicted RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 SMPDL3BQ92485 455 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 IRF7Q92985 503 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ARPC5LQ9BPX5 153 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 CDC40O60508 579 aaKnown RBP eCLIP7.99□□□□□ -1.132e-6■□□□□ 10.8
PCM1-212ENST00000519253 HBQ1P09105 142 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 GABRB1P18505 474 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 NRG3P56975 720 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 C21orf58P58505 322 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 RAB5BP61020 215 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 COMMD2Q86X83 199 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 FAM129CQ86XR2 697 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 CPA6Q8N4T0 437 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 KREMEN2Q8NCW0 462 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ABHD4Q8TB40 342 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 SMAP2Q8WU79 429 aaPredicted RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 PCNPQ8WW12 178 aaKnown RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 PHYHIPQ92561 330 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 RBM18Q96H35 190 aaKnown RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 S100A13Q99584 98 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 TTTY10Q9BZA0 68 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 IFT46Q9NQC8 304 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 SLC35A3Q9Y2D2 325 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 TBC1D3KA0A087X1G2 549 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 TBC1D3FA6NER0 549 aaPredicted RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 FRS3O43559 492 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 RLN2P04090 185 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 SOX2P48431 317 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ARL4DP49703 201 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 AMZ1Q400G9 498 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 SCGB2B2Q4G0G5 96 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ZNF385BQ569K4 471 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 TBC1D3GQ6DHY5 549 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 ELP2Q6IA86 826 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 KIAA1324Q6UXG2 1013 aaKnown RBP7.99□□□□□ -1.13
PCM1-212ENST00000519253 CFAP77Q6ZQR2 320 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 GPR135Q8IZ08 494 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 OR6T1Q8NGN1 323 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 DPH1Q9BZG8 443 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 C12orf10Q9HB07 376 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 SLC23A1Q9UHI7 598 aa7.99□□□□□ -1.13
PCM1-212ENST00000519253 CLEC3AO75596 197 aa7.98□□□□□ -1.13
PCM1-212ENST00000519253 NFATC1O95644 943 aa7.98□□□□□ -1.13
PCM1-212ENST00000519253 ELNP15502 786 aa7.98□□□□□ -1.13
PCM1-212ENST00000519253 S100A11P31949 105 aa7.98□□□□□ -1.13
PCM1-212ENST00000519253 EIF2B5Q13144 721 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms