RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 C1GALT1C1Q96EU7 318 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 SH3YL1Q96HL8 342 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-219ENST00000518824 SFXN2Q96NB2 322 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 TRIB1Q96RU8 372 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 TBL1XR1Q9BZK7 514 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 VIPAS39Q9H9C1 493 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 DUSP22Q9NRW4 184 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 SLC6A13Q9NSD5 602 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 COQ3Q9NZJ6 369 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 KCNE5Q9UJ90 142 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 FAF1Q9UNN5 650 aaPredicted RBP12.05□□□□□ -0.48
VEGFA-219ENST00000518824 PKDREJQ9NTG1 2253 aa12.05□□□□□ -0.48
VEGFA-219ENST00000518824 IGLV3-32A0A0A0MS00 114 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 PRAMEF27A3QJZ7 478 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 AHRRA9YTQ3 701 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 NPIPB9F8W1W9 429 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 ACTL6AO96019 429 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 GSNP06396 782 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 OR12D1P0DN82 309 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 AGFG1P52594 562 aaKnown RBP12.04□□□□□ -0.48
VEGFA-219ENST00000518824 ZNF136P52737 540 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 SUCLG1P53597 346 aaKnown RBP12.04□□□□□ -0.48
VEGFA-219ENST00000518824 PPP2R2AP63151 447 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 FUT5Q11128 374 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 SNTB1Q13884 538 aaKnown RBP12.04□□□□□ -0.48
VEGFA-219ENST00000518824 SAXO2Q658L1 398 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 TNFAIP8L2Q6P589 184 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-219ENST00000518824 EPGNQ6UW88 154 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 ZNF295-AS1Q8N0V1 137 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 C9orf106Q8NAJ2 232 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 LRRC8CQ8TDW0 803 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 ACTRT2Q8TDY3 377 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 ASB5Q8WWX0 329 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 THOC1Q96FV9 657 aaKnown RBP12.04□□□□□ -0.48
VEGFA-219ENST00000518824 SLC35G5Q96KT7 338 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 C7orf26Q96N11 449 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 SDF2Q99470 211 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 OR51I1Q9H343 314 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 ARGLU1Q9NWB6 273 aaPredicted RBP12.04□□□□□ -0.48
VEGFA-219ENST00000518824 VDAC3Q9Y277 283 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 MRPS18CQ9Y3D5 142 aaKnown RBP12.04□□□□□ -0.48
VEGFA-219ENST00000518824 ZNF337Q9Y3M9 751 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 PCDHGB3Q9Y5G1 929 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 NAV2Q8IVL1 2488 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 MED12LQ86YW9 2145 aa12.04□□□□□ -0.48
VEGFA-219ENST00000518824 INTS1Q8N201 2190 aaKnown RBP12.03□□□□□ -0.48
VEGFA-219ENST00000518824 CENPEQ02224 2701 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 OR2M5A3KFT3 312 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 HMGB1P1B2RPK0 211 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-219ENST00000518824 SLCO1B7G3V0H7 640 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 NDUFB5O43674 189 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 FCMRO60667 390 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 PGRP06401 933 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 NGFRP08138 427 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 CPN1P15169 458 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 ZNF708P17019 499 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 CEACAM8P31997 349 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-219ENST00000518824 IDH3AP50213 366 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 CLNS1AP54105 237 aaKnown RBP12.03□□□□□ -0.48
VEGFA-219ENST00000518824 CLDN20P56880 219 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 C17orf67Q0P5P2 114 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 FOXF2Q12947 444 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 TMEM44Q2T9K0 475 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 GTDC1Q4AE62 458 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 PDCD4Q53EL6 469 aaKnown RBP12.03□□□□□ -0.48
VEGFA-219ENST00000518824 RIPPLY2Q5TAB7 128 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 ANXA8L1Q5VT79 327 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 RAET1LQ5VY80 246 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 NSUN5P2Q63ZY6 315 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 CBLN3Q6UW01 205 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 HMGN2P46Q86SG4 172 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 UBQLNLQ8IYU4 475 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 ACBD4Q8NC06 268 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 MOAP1Q96BY2 351 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 CCDC115Q96NT0 180 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 OR52E6Q96RD3 313 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 SDHAF3Q9NRP4 125 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 UBQLN4Q9NRR5 601 aa12.03□□□□□ -0.48
VEGFA-219ENST00000518824 INTS9Q9NV88 658 aaKnown RBP12.03□□□□□ -0.48
VEGFA-219ENST00000518824 ITPR2Q14571 2701 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 CLCA1A8K7I4 914 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 H0Y3Z8 333 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.49
VEGFA-219ENST00000518824 BCAS1O75363 584 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-219ENST00000518824 TNFRSF21O75509 655 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 TGM6O95932 706 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 OPN1LWP04000 364 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 HOXD4P09016 255 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-219ENST00000518824 IL11P20809 199 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 UQCRC2P22695 453 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 CHMP24386 653 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 DLX5P56178 289 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 ZNF117Q03924 483 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 MAPK14Q16539 360 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 FLYWCH1Q4VC44 716 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 KLHL26Q53HC5 615 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 COX20Q5RI15 118 aa12.02□□□□□ -0.49
VEGFA-219ENST00000518824 DNAJC14Q6Y2X3 702 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-219ENST00000518824 ADGRE4PQ86SQ3 457 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms