RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SERPINA9Q86WD7 417 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 CENPLQ8N0S6 344 aaPredicted RBP3.28□□□□□ -1.88
SQLE-202ENST00000518604 FAM122AQ96E09 287 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 SDSLQ96GA7 329 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 VSIG2Q96IQ7 327 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 AKR1E2Q96JD6 320 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 C16orf45Q96MC5 204 aaPredicted RBP3.28□□□□□ -1.88
SQLE-202ENST00000518604 TMEM121Q9BTD3 319 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 TSSK1BQ9BXA7 367 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 DPH5Q9H2P9 285 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 B4GALT7Q9UBV7 327 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 KLHL21Q9UJP4 597 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 CLEC4EQ9ULY5 219 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 PDE10AQ9Y233 779 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 MFHAS1Q9Y4C4 1052 aa3.28□□□□□ -1.88
SQLE-202ENST00000518604 PPIAL4CA0A0B4J2A2 164 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 KLF18A0A0U1RQI7 1052 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 SAGE2PA6NJ88 616 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 KLLNB2CW77 178 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 B4DXG7 233 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 TNFSF11O14788 317 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 LANCL1O43813 399 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 DIRAS3O95661 229 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 KRTAP1-4P0C5Y4 121 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 PPIAL4GP0DN37 164 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 KLK2P20151 261 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 ATP5A1P25705 553 aaKnown RBP3.27□□□□□ -1.89
SQLE-202ENST00000518604 IL2RGP31785 369 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 RGRP47804 291 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 TRPC1P48995 793 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 DHPSP49366 369 aaPredicted RBP3.27□□□□□ -1.89
SQLE-202ENST00000518604 NOVA1P51513 510 aaKnown RBP3.27□□□□□ -1.89
SQLE-202ENST00000518604 EFNA3P52797 238 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 RPL8P62917 257 aaKnown RBP3.27□□□□□ -1.89
SQLE-202ENST00000518604 VLDLRP98155 873 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 ATXN7L3Q14CW9 347 aaPredicted RBP3.27□□□□□ -1.89
SQLE-202ENST00000518604 SBK1Q52WX2 424 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 PVRIGQ6DKI7 326 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 OR5M10Q6IEU7 315 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 LANCL3Q6ZV70 420 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 ERASQ7Z444 233 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 GPR65Q8IYL9 337 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 UBQLNLQ8IYU4 475 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 OR9A4Q8NGU2 314 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 DHTKD1Q96HY7 919 aaPredicted RBP3.27□□□□□ -1.89
SQLE-202ENST00000518604 DHX33Q9H6R0 707 aaKnown RBP3.27□□□□□ -1.89
SQLE-202ENST00000518604 ZNF702PQ9H963 129 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 MOKQ9UQ07 419 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 RALGAPA1Q6GYQ0 2036 aa3.27□□□□□ -1.89
SQLE-202ENST00000518604 ANKRD30BQ9BXX2 1392 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 A0A1B0GWJ7 208 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 A8MU10 97 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 E7ENQ6 273 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 K7ENP7 123 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 CDX4O14627 284 aaPredicted RBP3.26□□□□□ -1.89
SQLE-202ENST00000518604 HAT1O14929 419 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 MAPK13O15264 365 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 LATO43561 262 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 IDH1O75874 414 aaKnown RBP3.26□□□□□ -1.89
SQLE-202ENST00000518604 LY6G6DO95868 133 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 CSF2P04141 144 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 GCFC2P16383 781 aaKnown RBP3.26□□□□□ -1.89
SQLE-202ENST00000518604 PTBP1P26599 531 aaKnown RBP eCLIP3.26□□□□□ -1.89
SQLE-202ENST00000518604 RIPPLY3P57055 190 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 OC90Q02509 493 aaPredicted RBP3.26□□□□□ -1.89
SQLE-202ENST00000518604 CSTF1Q05048 431 aaKnown RBP3.26□□□□□ -1.89
SQLE-202ENST00000518604 RIPPLY1Q0D2K3 151 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 ISXQ2M1V0 245 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 FAM120AOSQ5T036 256 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 TFAP2EQ6VUC0 442 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 SH2D6Q7Z4S9 175 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 VASH2Q86V25 355 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 ZNF573Q86YE8 665 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 FADS6Q8N9I5 356 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 MYLPFQ96A32 169 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 B3GALT6Q96L58 329 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 ZNF416Q9BWM5 594 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 PPDPFQ9H3Y8 114 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 COQ10BQ9H8M1 238 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 UTP6Q9NYH9 597 aaKnown RBP3.26□□□□□ -1.89
SQLE-202ENST00000518604 EPS15L1Q9UBC2 864 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 CA5BQ9Y2D0 317 aa3.26□□□□□ -1.89
SQLE-202ENST00000518604 GSAPA4D1B5 854 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 EPOPA6NHQ4 379 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 OR6C65A6NJZ3 312 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 FAM74A7A6NL05 159 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 DHRS7CA6NNS2 312 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 WWP2O00308 870 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 OR7A17O14581 309 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 SCRG1O75711 98 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 PGK1P00558 417 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 STSP08842 583 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 NCF1P14598 390 aaPredicted RBP3.25□□□□□ -1.89
SQLE-202ENST00000518604 UGT1A3P35503 534 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 ACADVLP49748 655 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 MRPS11P82912 194 aaKnown RBP3.25□□□□□ -1.89
SQLE-202ENST00000518604 RGS1Q08116 209 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 RNF212Q495C1 297 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 FAM74A3Q4VXF1 159 aa3.25□□□□□ -1.89
SQLE-202ENST00000518604 CELF3Q5SZQ8 465 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms