RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ACE2Q9BYF1 805 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 AMBRA1Q9C0C7 1298 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR51E2Q9H255 320 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 NXF3Q9H4D5 531 aaKnown RBP4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 MTG2Q9H4K7 406 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 EXO5Q9H790 373 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 BRF2Q9HAW0 419 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 POPDC2Q9HBU9 364 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 GALNT9Q9HCQ5 603 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 CHST11Q9NPF2 352 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 ACSS2Q9NR19 701 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 TLR8Q9NR97 1041 aaKnown RBP4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 SERINC1Q9NRX5 453 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 PDP1Q9P0J1 537 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 GNG8Q9UK08 70 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 RPH3ALQ9UNE2 315 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 SAMD4AQ9UPU9 718 aaKnown RBP4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 ICKQ9UPZ9 632 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 POMT1Q9Y6A1 747 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 MTCH2Q9Y6C9 303 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 CLCA3PQ9Y6N3 262 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 TOGARAM1Q9Y4F4 1720 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 SCN9AQ15858 1988 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A096LPK6 155 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A0J9YYE9 177 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TCRBV21S2A2A0A5A6 115 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 IRGMA1A4Y4 181 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MEX3AA1L020 520 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LCHNA4D1U4 455 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR6C68A6NDL8 312 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TBC1D3BA6NDS4 549 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 NEMP2A6NFY4 417 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 COLCA2A8K830 154 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 GSG1L2A8MUP6 293 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SNRPGP15A8MWD9 76 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 A8MWP6 167 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MCRIP1C9JLW8 97 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 LRRN3E7EW58 273 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 G3V2L1 256 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 UBE2Q2LH0YL09 131 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 K7EP13 123 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 UPK1AO00322 258 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 BHLHE40O14503 412 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TP53I11O14683 189 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 KDELR3O43731 214 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC37A4O43826 429 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CACNG3O60359 315 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR10H2O60403 315 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM127O75204 238 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 REM1O75628 298 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ATP6AP2O75787 350 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 RPP40O75818 363 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SCAF4O95104 1147 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 NXPH2O95156 264 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 C22orf31O95567 290 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 NDUFB10O96000 172 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CFDP00746 253 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CALCAP01258 141 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 C1QAP02745 245 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PPBPP02775 128 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ALDOAP04075 364 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 IFNA6P05013 189 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 IGKV5-2P06315 115 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SNRPA1P09661 255 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CD3GP09693 182 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 STAG3L3P0CL85 134 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 HKR1P10072 659 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 NR2F6P10588 404 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PIPP12273 146 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 UNGP13051 313 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 AKR1A1P14550 325 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PGAM1P18669 254 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CD58P19256 250 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 BCKDHBP21953 392 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 BDKRB2P30411 391 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 CCR1P32246 355 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 RPL4P36578 427 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC1A2P43004 574 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MAGEB1P43366 347 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PXNP49023 591 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 EVX1P49640 407 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 RGS4P49798 205 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 RENBPP51606 427 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 VAMP7P51809 220 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC12A3P55017 1021 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TPI1P60174 286 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SEC61A1P61619 476 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 MRPS10P82664 201 aaKnown RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 EMX2Q04743 252 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRKCZQ05513 592 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PIGFQ07326 219 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 RSU1Q15404 277 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 TAZQ16635 292 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 C14orf28Q4W4Y0 310 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 PLA1AQ53H76 456 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 SOWAHCQ53LP3 525 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF628Q5EBL2 1059 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 FAM74A1Q5RGS3 127 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 AKR1C8PQ5T2L2 129 aa4.5□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZDHHC20Q5W0Z9 365 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms