RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SPACA6W5XKT8 324 aa-1.68□□□□□ -2.68
RNU6-542P-201ENST00000516405 SETD2Q9BYW2 2564 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 APC2O95996 2303 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 KIAA1109Q2LD37 5005 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 IGKV2-40A0A087WW87 121 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 PLAC8L1A1L4L8 177 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 LEUTXA8MZ59 168 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 PGRMC2O15173 223 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 ADAMDEC1O15204 470 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 SCRG1O75711 98 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 SNAPINO95295 136 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 ANP32DO95626 131 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 IGKV2D-40P01614 121 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 BDNFP23560 247 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 DCKP27707 260 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 SLC10A7Q0GE19 358 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 NRF1Q16656 503 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 DCAF12Q5T6F0 453 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 GKAP1Q5VSY0 366 aaPredicted RBP-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 SNX30Q5VWJ9 437 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 UNQ9370/PRO34162Q6UXP9 181 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 CCDC63Q8NA47 563 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 CATSPER1Q8NEC5 780 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 OR13C5Q8NGS8 318 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 NDRG1Q92597 394 aaKnown RBP-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 PSMG2Q969U7 264 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 BPIFA2Q96DR5 249 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 CELF6Q96J87 481 aaKnown RBP-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 WFIKKN1Q96NZ8 548 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 CCM2Q9BSQ5 444 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 DDX47Q9H0S4 455 aaKnown RBP-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 CYSTM1Q9H1C7 97 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 SLC25A22Q9H936 323 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 NIT2Q9NQR4 276 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 EXOSC3Q9NQT5 275 aaKnown RBP-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 ASF1BQ9NVP2 202 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 AIG1Q9NVV5 245 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 ARHGEF38Q9NXL2 777 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF226Q9NYT6 803 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF492Q9P255 531 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 RPS6KL1Q9Y6S9 549 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 SETD1AO15047 1707 aaKnown RBP-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 FREM1Q5H8C1 2179 aa-1.69□□□□□ -2.68
RNU6-542P-201ENST00000516405 LPAP08519 4548 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 PKD1L1Q8TDX9 2849 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 A0A1W2PNM2 257 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 MYBPHLA2RUH7 354 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 GOLGA6CA6NDK9 693 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 GOLGA6BA6NDN3 693 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 NPIPB15A6NHN6 443 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 C19orf81C9J6K1 198 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 CTAGE5O15320 804 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 PGLSO95336 258 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 PARNO95453 639 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 TSPAN13O95857 204 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 SLC4A1P02730 911 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 RAB40ALP0C0E4 278 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 C1GALT1C1LP0DN25 315 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 SAGP10523 405 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 GZMAP12544 262 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 TDGF1P13385 188 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 CDH2P19022 906 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 SLC1A3P43003 542 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 TDGF1P3P51864 188 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 RPL7AP62424 266 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 ICA1Q05084 483 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF763Q0D2J5 394 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 AP1B1Q10567 949 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 IFT88Q13099 833 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 GPR68Q15743 365 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 RBBP7Q16576 425 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 MEA1Q16626 185 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 UGCGQ16739 394 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 ADCK5Q3MIX3 580 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 VAX1Q5SQQ9 334 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 AMMECR1LQ6DCA0 310 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 FRMPD2BQ6IN97 320 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 FUT10Q6P4F1 479 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 LYPD2Q6UXB3 125 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF620Q6ZNG0 422 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 SKA3Q8IX90 412 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 RYBPQ8N488 228 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 CCDC191Q8NCU4 936 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 ICA1LQ8NDH6 482 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 TTC8Q8TAM2 541 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 DTX3LQ8TDB6 740 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 TCP11Q8WWU5 503 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 LPGAT1Q92604 370 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 MRPL24Q96A35 216 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 LRRC59Q96AG4 307 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 PYCR2Q96C36 320 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF274Q96GC6 653 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 NARS2Q96I59 477 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 GDAP1L1Q96MZ0 367 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 RAB40CQ96S21 281 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 RHOXF2Q9BQY4 288 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 TRIM7Q9C029 511 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 WDR12Q9GZL7 423 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 MAGT1Q9H0U3 335 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 ABCG8Q9H221 673 aa-1.7□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms