RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 MARCH3Q86UD3 253 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 TREML1Q86YW5 311 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 POU5F2Q8N7G0 328 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 ANKFN1Q8N957 763 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 BCAS4Q8TDM0 211 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 SLC38A5Q8WUX1 472 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 RCN3Q96D15 328 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 GNRHR2Q96P88 292 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 UBQLN3Q9H347 655 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 ACKR4Q9NPB9 350 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 SUCOQ9UBS9 1254 aaKnown RBP10.86□□□□□ -0.67
SNF8-215ENST00000515572 MKLN1Q9UL63 735 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 NPIPA1Q9UND3 350 aa10.86□□□□□ -0.67
SNF8-215ENST00000515572 DSPPQ9NZW4 1301 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 A0A0G2JPF8 293 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 PRAMEF27A3QJZ7 478 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 HNRNPCL2B2RXH8 293 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 HNRNPCL3B7ZW38 293 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 C5orf58C9J3I9 102 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 AIM2O14862 343 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 SUSD5O60279 629 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 HCN1O60741 890 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 HNRNPCL1O60812 293 aaKnown RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 UGT2B17O75795 530 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 ZIC2O95409 532 aaPredicted RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 CBX6O95503 412 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 HPNP05981 417 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 BCHEP06276 602 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 CHRM4P08173 479 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 RFPL3SP0C7P2 107 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 HNRNPCL4P0DMR1 293 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 MSX1P28360 303 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 ADH7P40394 386 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 MTPNP58546 118 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 RBPJQ06330 500 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 RBBP4Q09028 425 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 ART3Q13508 389 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 ELOAQ14241 798 aaKnown RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 CAPRIN1Q14444 709 aaKnown RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 GANABQ14697 944 aaKnown RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 ZNF630Q2M218 657 aaPredicted RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 CMPK2Q5EBM0 449 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 NANOGP8Q6NSW7 305 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 ARHGAP11AQ6P4F7 1023 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 GFRALQ6UXV0 394 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 HACD2Q6Y1H2 254 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 GHDCQ8N2G8 530 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 FADS6Q8N9I5 356 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 OR4K17Q8NGC6 315 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 DUSP19Q8WTR2 217 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 TMEM19Q96HH6 336 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 HOPXQ9BPY8 73 aaPredicted RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 TREX2Q9BQ50 279 aaPredicted RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 SPATA9Q9BWV2 254 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 RTN4RQ9BZR6 473 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 DEFB127Q9H1M4 99 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 TSPAN10Q9H1Z9 355 aaPredicted RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 SLC38A1Q9H2H9 487 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 IKZF5Q9H5V7 419 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 TMEM38AQ9H6F2 299 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 KAT8Q9H7Z6 458 aaKnown RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 PTGES2Q9H7Z7 377 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 MTHFD2LQ9H903 347 aaPredicted RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 NANOGQ9H9S0 305 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 PLSCR2Q9NRY7 297 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 AP3M1Q9Y2T2 418 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 MRPS18CQ9Y3D5 142 aaKnown RBP10.85□□□□□ -0.67
SNF8-215ENST00000515572 FREM3P0C091 2139 aa10.85□□□□□ -0.67
SNF8-215ENST00000515572 NPIPA5A0A0B4J1W7 369 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 A0A1B0GVC2 190 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 ANKUB1A6NFN9 424 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 SERINC4A6NH21 518 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 AGAP5A6NIR3 686 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 NPIPA7E9PJI5 369 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 CDC40O60508 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
SNF8-215ENST00000515572 TRAPPC6AO75865 159 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 IGHG3P01860 377 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 DBIP07108 87 aaKnown RBP10.84□□□□□ -0.67
SNF8-215ENST00000515572 NUDT7P0C024 238 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 NPIPA8P0DM63 369 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 ARAFP10398 606 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 PLA2G2AP14555 144 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 SRD5A2P31213 254 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 NUDT2P50583 147 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 SUMO3P55854 103 aaPredicted RBP10.84□□□□□ -0.67
SNF8-215ENST00000515572 DSCR4P56555 118 aaPredicted RBP10.84□□□□□ -0.67
SNF8-215ENST00000515572 CDK6Q00534 326 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 CHRNEQ04844 493 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 FGFBP1Q14512 234 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 TOMM20Q15388 145 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 MAPK11Q15759 364 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 CYP51A1Q16850 503 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.84□□□□□ -0.67
SNF8-215ENST00000515572 PDZK1Q5T2W1 519 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 OR5M10Q6IEU7 315 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 REEP3Q6NUK4 255 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 SLC30A8Q8IWU4 369 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 CMIPQ8IY22 773 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 PEX5LQ8IYB4 626 aa10.84□□□□□ -0.67
SNF8-215ENST00000515572 ZNF614Q8N883 585 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms