RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MAVSQ7Z434 540 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 C6orf120Q7Z4R8 191 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 ADGRE4PQ86SQ3 457 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 ZNF527Q8NB42 609 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 CHDHQ8NE62 594 aaPredicted RBP11.59□□□□□ -0.55
CLCN3-210ENST00000515420 OR10Q1Q8NGQ4 319 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 OR4C3Q8NH37 302 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 OR5AK3PQ8NH89 298 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 DUSP19Q8WTR2 217 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 OIT3Q8WWZ8 545 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 C1GALT1C1Q96EU7 318 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 CHMP6Q96FZ7 201 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 SFXN2Q96NB2 322 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 ZBTB18Q99592 522 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 RTN4RQ9BZR6 473 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 KCNJ16Q9NPI9 418 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 SDR39U1Q9NRG7 319 aaPredicted RBP11.59□□□□□ -0.55
CLCN3-210ENST00000515420 MED11Q9P086 117 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 Q9UFV3 132 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 CAMK2AQ9UQM7 478 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 USH1CQ9Y6N9 552 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 CENPEQ02224 2701 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 CACNA1DQ01668 2161 aa11.59□□□□□ -0.55
CLCN3-210ENST00000515420 INTS1Q8N201 2190 aaKnown RBP11.58□□□□□ -0.56
CLCN3-210ENST00000515420 A0A087WZY1 265 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 RNF103-CHMP3A0A140T963 221 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 MBD3L4A6NDZ8 208 aaPredicted RBP11.58□□□□□ -0.56
CLCN3-210ENST00000515420 MBD3L3A6NE82 208 aaPredicted RBP11.58□□□□□ -0.56
CLCN3-210ENST00000515420 MBD3L5A6NJ08 208 aaPredicted RBP11.58□□□□□ -0.56
CLCN3-210ENST00000515420 SCDO00767 359 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 UBDO15205 165 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 IL2RAP01589 272 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 IL6P05231 212 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 PGRP06401 933 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 GUSBP08236 651 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 PEPDP12955 493 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 MATN1P21941 496 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 ADH7P40394 386 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 MRPL19P49406 292 aaKnown RBP11.58□□□□□ -0.56
CLCN3-210ENST00000515420 B3GALT5-AS1P59052 145 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 UFM1P61960 85 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 TFF3Q07654 80 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 STX5Q13190 355 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 AP1ARQ63HQ0 302 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 SAXO2Q658L1 398 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 NXNQ6DKJ4 435 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 EPGNQ6UW88 154 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 MSANTD1Q6ZTZ1 278 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 SEM1Q6ZVN7 128 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 ZAR1Q86SH2 424 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 CCDC71Q8IV32 467 aaPredicted RBP11.58□□□□□ -0.56
CLCN3-210ENST00000515420 TRIML2Q8N7C3 387 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 MBD3L2Q8NHZ7 208 aaPredicted RBP11.58□□□□□ -0.56
CLCN3-210ENST00000515420 DYDC1Q8WWB3 177 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 NEURL3Q96EH8 262 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 SLC35G5Q96KT7 338 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 TEX37Q96LM6 180 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 ZFP3Q96NJ6 502 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 OR7D2Q96RA2 312 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 SPOCK3Q9BQ16 436 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 TREX2Q9BQ50 279 aaPredicted RBP11.58□□□□□ -0.56
CLCN3-210ENST00000515420 PIGQQ9BRB3 760 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 NMUR2Q9GZQ4 415 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 ENKD1Q9H0I2 346 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 ACBD3Q9H3P7 528 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 INTS9Q9NV88 658 aaKnown RBP11.58□□□□□ -0.56
CLCN3-210ENST00000515420 FBXO34Q9NWN3 711 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 ZIM2Q9NZV7 527 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 NBPF19A0A087WUL8 3843 aa11.58□□□□□ -0.56
CLCN3-210ENST00000515420 C7orf72A4D263 438 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 C17orf51A8MQB3 221 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 NPIPB9F8W1W9 429 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 H0Y3Z8 333 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 SLC22A3O75751 556 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 TOXO94900 526 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 COX6B1P14854 86 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF17P17021 662 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 IGFBP2P18065 325 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 HK1P19367 917 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 IL12AP29459 219 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 MAGEA8P43361 318 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 ATP12AP54707 1039 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 CLDN18P56856 261 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 IRX1P78414 480 aaPredicted RBP11.57□□□□□ -0.56
CLCN3-210ENST00000515420 CCNJQ5T5M9 372 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 RAET1LQ5VY80 246 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 HEPHL1Q6MZM0 1159 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 GALNT10Q86SR1 603 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 ANKRD46Q86W74 232 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 STON2Q8WXE9 905 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 OTUB1Q96FW1 271 aaPredicted RBP11.57□□□□□ -0.56
CLCN3-210ENST00000515420 OR52E6Q96RD3 313 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 SDF2Q99470 211 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 SERHL2Q9H4I8 314 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 SLC24A3Q9HC58 644 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 POLE3Q9NRF9 147 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 EXD2Q9NVH0 621 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 STOML1Q9UBI4 398 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF629Q9UEG4 869 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms