RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SNX13Q9Y5W8 968 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 EML6Q6ZMW3 1958 aa19.23■□□□□ 0.67
LSM6-207ENST00000515311 NPIPA5A0A0B4J1W7 369 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 TRAV17A0A0B4J275 112 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 NPIPA7E9PJI5 369 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 K7EM74 188 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 NME2P1O60361 137 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 DPM1O60762 260 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 SP1P08047 785 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 NPIPA8P0DM63 369 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 ENDOUP21128 410 aaKnown RBP19.22■□□□□ 0.67
LSM6-207ENST00000515311 NME2P22392 152 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 CD97P48960 835 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 TRIM25Q14258 630 aaKnown RBP19.22■□□□□ 0.67
LSM6-207ENST00000515311 MAPK14Q16539 360 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 PDZK1Q5T2W1 519 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 SLC30A6Q6NXT4 461 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 ASB18Q6ZVZ8 466 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 SCMH1Q96GD3 660 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 FRMD6Q96NE9 622 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 QRSL1Q9H0R6 528 aaKnown RBP19.22■□□□□ 0.67
LSM6-207ENST00000515311 HHATLQ9HCP6 504 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 KLRF1Q9NZS2 232 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 EGFL7Q9UHF1 273 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 ZNF232Q9UNY5 417 aa19.22■□□□□ 0.67
LSM6-207ENST00000515311 KLF13Q9Y2Y9 288 aaPredicted RBP19.22■□□□□ 0.67
LSM6-207ENST00000515311 CENPVL1A0A0U1RR11 272 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 H3BNH8 94 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 ERVH48-1M5A8F1 160 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 ADAM10O14672 748 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 GMNNO75496 209 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 SNX4O95219 450 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 IFNA14P01570 189 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 SFTPCP11686 197 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 NID1P14543 1247 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 KDELR2P33947 212 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 ADH7P40394 386 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 PTGDSP41222 190 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 GAS1P54826 345 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 ELOAQ14241 798 aaKnown RBP19.21■□□□□ 0.67
LSM6-207ENST00000515311 LARS2Q15031 903 aaKnown RBP19.21■□□□□ 0.67
LSM6-207ENST00000515311 ZSWIM7Q19AV6 140 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 LIN52Q52LA3 116 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 SLC25A25Q6KCM7 469 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 APOOLQ6UXV4 268 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 ARMC8Q8IUR7 673 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 CMIPQ8IY22 773 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 TMEM178AQ8NBL3 297 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 CATSPER1Q8NEC5 780 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 OR52P1PQ8NH57 321 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 WDR60Q8WVS4 1066 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 FIG4Q92562 907 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 ASB9Q96DX5 294 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 OSBPL11Q9BXB4 747 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 GORASP2Q9H8Y8 452 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 CSAG2Q9Y5P2 127 aa19.21■□□□□ 0.67
LSM6-207ENST00000515311 PIEZO2Q9H5I5 2752 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 SERINC4A6NH21 518 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 M0QX08 132 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 ARPC2O15144 300 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 RRP9O43818 475 aaKnown RBP19.2■□□□□ 0.66
LSM6-207ENST00000515311 MFN2O95140 757 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 PABPC4LP0CB38 370 aaKnown RBP19.2■□□□□ 0.66
LSM6-207ENST00000515311 IL7RP16871 459 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 CNR1P21554 472 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 PRKAR1BP31321 381 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 MSX2P35548 267 aaPredicted RBP19.2■□□□□ 0.66
LSM6-207ENST00000515311 CRYBA2P53672 197 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 FGFBP1Q14512 234 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 ZNF766Q5HY98 468 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 PRAMEF20Q5VT98 475 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 RNF220Q5VTB9 566 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 FNDC7Q5VTL7 733 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 BICRALQ6AI39 1079 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 GLYATQ6IB77 296 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 Q6ZS92 163 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 MISPQ8IVT2 679 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 BHLHE22Q8NFJ8 381 aaPredicted RBP19.2■□□□□ 0.66
LSM6-207ENST00000515311 OR52E4Q8NGH9 312 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 RASSF5Q8WWW0 418 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 TAMM41Q96BW9 452 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 CCDC124Q96CT7 223 aaKnown RBP19.2■□□□□ 0.66
LSM6-207ENST00000515311 PCDHAC1Q9H158 963 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 PROK2Q9HC23 129 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 SDHAF3Q9NRP4 125 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 ACTR3BQ9P1U1 418 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 SEC14L3Q9UDX4 400 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 ZNF443Q9Y2A4 671 aaPredicted RBP19.2■□□□□ 0.66
LSM6-207ENST00000515311 WIF1Q9Y5W5 379 aa19.2■□□□□ 0.66
LSM6-207ENST00000515311 EPG5Q9HCE0 2579 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 NDUFB5O43674 189 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 SCO2O43819 266 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 SORBS2O94875 1100 aaKnown RBP19.19■□□□□ 0.66
LSM6-207ENST00000515311 NCK1P16333 377 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 TRAP1Q12931 704 aaKnown RBP19.19■□□□□ 0.66
LSM6-207ENST00000515311 LRRC23Q53EV4 343 aaPredicted RBP19.19■□□□□ 0.66
LSM6-207ENST00000515311 ZNF311Q5JNZ3 666 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 DHRS4L2Q6PKH6 230 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 EIF3MQ7L2H7 374 aaKnown RBP19.19■□□□□ 0.66
LSM6-207ENST00000515311 HMGN2P46Q86SG4 172 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms