RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CXorf58Q96LI9 332 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 HEXA-AS1Q9H8Q6 139 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 LTB4R2Q9NPC1 389 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 PADI2Q9Y2J8 665 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 B9A039 149 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 UPK1AO00322 258 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 MID1O15344 667 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 LZTS3O60299 673 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 KRT33AO76009 404 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 FCGR1AP12314 374 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 HLA-EP13747 358 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 DGKAP23743 735 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 FASP25445 335 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 CDKN1BP46527 198 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 GP2P55259 537 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 SOX8P57073 446 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 MTPNP58546 118 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 PTSQ03393 145 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 RIPPLY1Q0D2K3 151 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 BIKQ13323 160 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 GBX1Q14549 363 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 P2RY14Q15391 338 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 HYAL4Q2M3T9 481 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 NCMAPQ5T1S8 102 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 TRIM46Q7Z4K8 759 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 PXKQ7Z7A4 578 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 MSRB3Q8IXL7 192 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 CDK20Q8IZL9 346 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 DTWD1Q8N5C7 304 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 BVESQ8NE79 360 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 OR4Q3Q8NH05 313 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 SORCS2Q96PQ0 1159 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 P2RY13Q9BPV8 354 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 ZNF436Q9C0F3 470 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 SMG9Q9H0W8 520 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 DCSTAMPQ9H295 470 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 IKZF5Q9H5V7 419 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 RDH14Q9HBH5 336 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 IL19Q9UHD0 177 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 ERVW-1Q9UQF0 538 aa7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 COLQQ9Y215 455 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-219ENST00000514743 IGLV3-16A0A075B6K0 115 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 C5orf52A6NGY3 159 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 DVL2O14641 736 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 IGSF6O95976 241 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 SSTR2P30874 369 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 SDHAP31040 664 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 THBS4P35443 961 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ANXA11P50995 505 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ACTBP60709 375 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ACTA2P62736 377 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 RPL38P63173 70 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ACTG1P63261 375 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ACTG2P63267 376 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ACTC1P68032 377 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ACTA1P68133 377 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 RNF151Q2KHN1 245 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CDNFQ49AH0 187 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 COL13A1Q5TAT6 717 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 PRAMEF20Q5VT98 475 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 TBPL2Q6SJ96 375 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 PGAP1Q75T13 922 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 GPR149Q86SP6 731 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 PPP1R3BQ86XI6 285 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 FOXRED2Q8IWF2 684 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 POGLUT1Q8NBL1 392 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 SHDQ96IW2 340 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 TMEM208Q9BTX3 173 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ZBP1Q9H171 429 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 TMPRSS5Q9H3S3 457 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 SPG21Q9NZD8 308 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CXXC1Q9P0U4 656 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 HCN3Q9P1Z3 774 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CRLS1Q9UJA2 301 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 OSGIN1Q9UJX0 560 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CCL26Q9Y258 94 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CHD9Q3L8U1 2897 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 A0A0B4J293 547 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 AIPO00170 330 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 LEFTY2O00292 366 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 KPNA3O00505 521 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 FFAR3O14843 346 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 MYL12BO14950 172 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 GPR42O15529 346 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 LRRTM2O43300 516 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 PRKYO43930 277 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 OR10H3O60404 316 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CTNSO60931 367 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 PRSS23O95084 383 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 LGI1O95970 557 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CSF2P04141 144 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CKMP06732 381 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ADH1AP07327 375 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 C1SP09871 688 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 HOXB9P17482 250 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 MYL12AP19105 171 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CCR2P41597 374 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 ALDH3A2P51648 485 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 CCR5P51681 352 aa7.01□□□□□ -1.29
PDLIM5-219ENST00000514743 SUCLG1P53597 346 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms