RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LRRC8BQ6P9F7 803 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 CENPUQ71F23 418 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 SERPINA9Q86WD7 417 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 C11orf53Q8IXP5 236 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 UBQLNLQ8IYU4 475 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 LINC01561Q8N1V8 128 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 CNIH3Q8TBE1 160 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 NOL4LQ96MY1 436 aaPredicted RBP3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 GLT8D2Q9H1C3 349 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 DPH5Q9H2P9 285 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 WDR76Q9H967 626 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 POLD4Q9HCU8 107 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 B4GALT7Q9UBV7 327 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 ANAPC7Q9UJX3 599 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 KIF25-AS1Q9Y6Z4 181 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 E9PLD3 99 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 K7ENP7 123 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 TRIM3O75382 744 aaPredicted RBP3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 ZNF254O75437 659 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 OPN1LWP04000 364 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 KRT6BP04259 564 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 CALCBP10092 127 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 KRT6CP48668 564 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 STARP49675 285 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 NDPQ00604 133 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 ST3GAL3Q11203 375 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 KIAA0040Q15053 153 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 SBK1Q52WX2 424 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 C9orf129Q5T035 196 aaKnown RBP3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 AFTPHQ6ULP2 937 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 ZNF573Q86YE8 665 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 FADS6Q8N9I5 356 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 ZSCAN4Q8NAM6 433 aaPredicted RBP3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 BADQ92934 168 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 PSMG2Q969U7 264 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 C4orf36Q96KX1 117 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 KIR2DL4Q99706 377 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 C19orf24Q9BVV8 132 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 GSDMCQ9BYG8 508 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 COG4Q9H9E3 785 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 APOBEC3BQ9UH17 382 aaKnown RBP3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 CHMP2BQ9UQN3 213 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 CA5BQ9Y2D0 317 aa3.7□□□□□ -1.82
HMGCS1-207ENST00000514610 CTAGE5O15320 804 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 STX7O15400 261 aaKnown RBP3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 B3GAT3O94766 335 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 PGK1P00558 417 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 IGF1P05019 195 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 TNNI3P19429 210 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 PRKAR2BP31323 418 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 GNPDA1P46926 289 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 NTHL1P78549 312 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 VLDLRP98155 873 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 RGS1Q08116 209 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 ATXN7L3Q14CW9 347 aaPredicted RBP3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 MAPK6Q16659 721 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 SCYL2Q6P3W7 929 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 APOBEC3FQ8IUX4 373 aaKnown RBP3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 TBC1D31Q96DN5 1066 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 SLC25A38Q96DW6 304 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 CNOT6LQ96LI5 555 aaKnown RBP3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 C16orf45Q96MC5 204 aaPredicted RBP3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 SLC30A2Q9BRI3 323 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 ZNF416Q9BWM5 594 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 MRPL39Q9NYK5 338 aaKnown RBP3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 SPRR3Q9UBC9 169 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 XPO7Q9UIA9 1087 aaKnown RBP3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 CRLS1Q9UJA2 301 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 KLHL21Q9UJP4 597 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 SMC3Q9UQE7 1217 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 FLVCR1Q9Y5Y0 555 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 CROCCQ5TZA2 2017 aa3.69□□□□□ -1.82
HMGCS1-207ENST00000514610 CARMIL1Q5VZK9 1371 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 NEBLO76041 1014 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 ANP32DO95626 131 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 F10P00742 488 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 ZP3P21754 424 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 ATP5A1P25705 553 aaKnown RBP3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 ACADVLP49748 655 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 RPL32P62910 135 aaKnown RBP3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 PRR4Q16378 134 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 TIGITQ495A1 244 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 OLFML2AQ68BL7 652 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 OR8G2PQ6IF36 304 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 CXCL17Q6UXB2 119 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 LRRC70Q7Z2Q7 622 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 DPY19L4Q7Z388 723 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 CENPLQ8N0S6 344 aaPredicted RBP3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 CEND1Q8N111 149 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 ZNF564Q8TBZ8 553 aaPredicted RBP3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 TRUB1Q8WWH5 349 aaKnown RBP3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 SDSLQ96GA7 329 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 AKR1E2Q96JD6 320 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 THUMPD2Q9BTF0 503 aaKnown RBP3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 YTHDF1Q9BYJ9 559 aaKnown RBP3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 ZNF702PQ9H963 129 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 MEAF6Q9HAF1 191 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 CHRNA9Q9UGM1 479 aa3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 SAMD4AQ9UPU9 718 aaKnown RBP3.68□□□□□ -1.82
HMGCS1-207ENST00000514610 ANKRD30BQ9BXX2 1392 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms