RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 MKLN1Q9UL63 735 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 A0A096LPI6 279 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 C15orf38-AP3S2A0A0A6YYH1 394 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 A0A1W2PP18 115 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 PRAMEF27A3QJZ7 478 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 TCEA1P23193 301 aaKnown RBP12.69□□□□□ -0.38
USP46-209ENST00000514536 DPP4P27487 766 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 SRD5A2P31213 254 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 CRATP43155 626 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 RNF144AP50876 292 aaPredicted RBP12.69□□□□□ -0.38
USP46-209ENST00000514536 ANXA11P50995 505 aaKnown RBP12.69□□□□□ -0.38
USP46-209ENST00000514536 GPAT3Q53EU6 434 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 KLHL26Q53HC5 615 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 FADS6Q8N9I5 356 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 C10orf82Q8WW14 230 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 PNPLA3Q9NST1 481 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 TAS2R10Q9NYW0 307 aa12.69□□□□□ -0.38
USP46-209ENST00000514536 A0A1W2PQD3 144 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 NPIPB9F8W1W9 429 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 CLIC1O00299 241 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 BCKDKO14874 412 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 ZIC3O60481 467 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 SNRPB2P08579 225 aaKnown RBP12.68□□□□□ -0.38
USP46-209ENST00000514536 ESRRAP11474 423 aaPredicted RBP12.68□□□□□ -0.38
USP46-209ENST00000514536 BMP7P18075 431 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 MVDP53602 400 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 DSCR4P56555 118 aaPredicted RBP12.68□□□□□ -0.38
USP46-209ENST00000514536 TXNL4AP83876 142 aaKnown RBP12.68□□□□□ -0.38
USP46-209ENST00000514536 FUT5Q11128 374 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 CD226Q15762 336 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 SYPL1Q16563 259 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 EMC4Q5J8M3 183 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 LRIF1Q5T3J3 769 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 WLSQ5T9L3 541 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 ZNF585AQ6P3V2 769 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 MSRB3Q8IXL7 192 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 ZNF614Q8N883 585 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 ANKFN1Q8N957 763 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 ZNF527Q8NB42 609 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 PHOSPHO1Q8TCT1 267 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 SSC4DQ8WTU2 575 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 DTNBP1Q96EV8 351 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 ELAC2Q9BQ52 826 aaKnown RBP12.68□□□□□ -0.38
USP46-209ENST00000514536 OR2B2Q9GZK3 357 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 ZNF350Q9GZX5 532 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 FAM107BQ9H098 131 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 PTGES2Q9H7Z7 377 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 SAR1AQ9NR31 198 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 ALKBH4Q9NXW9 302 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 SLC25A37Q9NYZ2 338 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 LEF1Q9UJU2 399 aaPredicted RBP12.68□□□□□ -0.38
USP46-209ENST00000514536 RPH3AQ9Y2J0 694 aaPredicted RBP12.68□□□□□ -0.38
USP46-209ENST00000514536 NDUFAF1Q9Y375 327 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 MRPS18CQ9Y3D5 142 aaKnown RBP12.68□□□□□ -0.38
USP46-209ENST00000514536 WDR45Q9Y484 360 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 DTNAQ9Y4J8 743 aa12.68□□□□□ -0.38
USP46-209ENST00000514536 ZNF407Q9C0G0 2248 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 IGLV3-32A0A0A0MS00 114 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 H6PDO95479 791 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 LDLRP01130 860 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 RNF224P0DH78 156 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 ETFAP13804 333 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 HOXB9P17482 250 aaPredicted RBP12.67□□□□□ -0.38
USP46-209ENST00000514536 HK1P19367 917 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 LSP1P33241 339 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 GNGT1P63211 74 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 CHRNEQ04844 493 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 CRYZQ08257 329 aaKnown RBP12.67□□□□□ -0.38
USP46-209ENST00000514536 PDZK1Q5T2W1 519 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 VASNQ6EMK4 673 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 TYW3Q6IPR3 259 aaKnown RBP12.67□□□□□ -0.38
USP46-209ENST00000514536 TSPEARQ8WU66 669 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 ABTB1Q969K4 478 aaPredicted RBP12.67□□□□□ -0.38
USP46-209ENST00000514536 ZG16BQ96DA0 208 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 SH3YL1Q96HL8 342 aaPredicted RBP12.67□□□□□ -0.38
USP46-209ENST00000514536 TIMP4Q99727 224 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 NMUR2Q9GZQ4 415 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 VAPAQ9P0L0 249 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 KCNE5Q9UJ90 142 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 LIPT1Q9Y234 373 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 MEMO1Q9Y316 297 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 NAV2Q8IVL1 2488 aa12.67□□□□□ -0.38
USP46-209ENST00000514536 NCKAP5O14513 1909 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 DOPEY2Q9Y3R5 2298 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 GMNCA6NCL1 334 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 WIPF3A6NGB9 483 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 H3BNH8 94 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 GTPBP1O00178 669 aaKnown RBP12.66□□□□□ -0.38
USP46-209ENST00000514536 ANGPT2O15123 496 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 UGT2B17O75795 530 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 NR2F1P10589 423 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 MAGEA8P43361 318 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 PER3P56645 1201 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 DSTNP60981 165 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 KLF10Q13118 480 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 RGNQ15493 299 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 ZNF141Q15928 474 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 ARSKQ6UWY0 536 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 FRRS1Q6ZNA5 592 aa12.66□□□□□ -0.38
USP46-209ENST00000514536 NCCRP1Q6ZVX7 275 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms