RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PIWIL3Q7Z3Z3 882 aaKnown RBP7.65□□□□□ -1.18
CCL28-204ENST00000514421 CARM1Q86X55 608 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 CHERPQ8IWX8 916 aaKnown RBP7.65□□□□□ -1.18
CCL28-204ENST00000514421 TRIML2Q8N7C3 387 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 POGLUT1Q8NBL1 392 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 PSD4Q8NDX1 1056 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 SIMC1Q8NDZ2 872 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 OR52N2Q8NGI0 321 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 OR5P2Q8WZ92 322 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 TFAP2CQ92754 450 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 CIDECQ96AQ7 238 aaPredicted RBP7.65□□□□□ -1.18
CCL28-204ENST00000514421 SPACA9Q96E40 222 aaPredicted RBP7.65□□□□□ -1.18
CCL28-204ENST00000514421 MAGED4Q96JG8 741 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 RNF145Q96MT1 663 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 RDH12Q96NR8 316 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 CIB1Q99828 191 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 OSBPL10Q9BXB5 764 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 NXF5Q9H1B4 397 aaKnown RBP7.65□□□□□ -1.18
CCL28-204ENST00000514421 ANKRA2Q9H9E1 313 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 C3orf14Q9HBI5 128 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 SACM1LQ9NTJ5 587 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 GPATCH2Q9NW75 528 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 CNIH4Q9P003 139 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 DNAJB9Q9UBS3 223 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 SAMD4AQ9UPU9 718 aaKnown RBP7.65□□□□□ -1.18
CCL28-204ENST00000514421 AURKCQ9UQB9 309 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 DTX4Q9Y2E6 619 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 AP4B1Q9Y6B7 739 aa7.65□□□□□ -1.18
CCL28-204ENST00000514421 TRIM64A6NGJ6 449 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 FRG2CA6NGY1 282 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 GSTA4O15217 222 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 EMC8O43402 210 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 SMNDC1O75940 238 aaKnown RBP eCLIP7.64□□□□□ -1.19
CCL28-204ENST00000514421 HPRP00739 348 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 CT45A8P0DMV1 189 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 CT45A9P0DMV2 189 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 KDELR2P33947 212 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 MC3RP41968 323 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 TMED10P49755 219 aaKnown RBP7.64□□□□□ -1.19
CCL28-204ENST00000514421 CHN2P52757 468 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 CRYBA2P53672 197 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 RPP38P78345 283 aaKnown RBP7.64□□□□□ -1.19
CCL28-204ENST00000514421 ALDH6A1Q02252 535 aaKnown RBP7.64□□□□□ -1.19
CCL28-204ENST00000514421 HSPB3Q12988 150 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 NTRK2Q16620 822 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 IQCCQ4KMZ1 466 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 CT45A2Q5DJT8 189 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 ENPP6Q6UWR7 440 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 TMEM107Q6UX40 140 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 TMEM64Q6YI46 380 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 ZNF621Q6ZSS3 439 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 CBLL1Q75N03 491 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 EIF3MQ7L2H7 374 aaKnown RBP7.64□□□□□ -1.19
CCL28-204ENST00000514421 SLC30A8Q8IWU4 369 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 OR2L13Q8N349 312 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 SVOPLQ8N434 492 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 FAM86B1Q8N7N1 296 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 ZFP62Q8NB50 900 aaPredicted RBP7.64□□□□□ -1.19
CCL28-204ENST00000514421 ST6GALNAC3Q8NDV1 305 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 PAQR8Q8TEZ7 354 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 FIG4Q92562 907 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 NR4A3Q92570 626 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 NEURL3Q96EH8 262 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 PYURFQ96I23 114 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 VSTM2LQ96N03 204 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 SECISBP2Q96T21 854 aaKnown RBP7.64□□□□□ -1.19
CCL28-204ENST00000514421 SLX1AQ9BQ83 275 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 ITPAQ9BY32 194 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 SEMA6AQ9H2E6 1030 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 RAD21L1Q9H4I0 556 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 PIF1Q9H611 641 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 ZNF696Q9H7X3 374 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 FOLH1BQ9HBA9 442 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 NEUROD4Q9HD90 331 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 SH2D2AQ9NP31 389 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 IL1RAPQ9NPH3 570 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 DDX18Q9NVP1 670 aaKnown RBP7.64□□□□□ -1.19
CCL28-204ENST00000514421 UBAP1Q9NZ09 502 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 USE1Q9NZ43 259 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 NTMQ9P121 344 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 RPS6KA6Q9UK32 745 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 OAZ3Q9UMX2 235 aa7.64□□□□□ -1.19
CCL28-204ENST00000514421 ZGRF1Q86YA3 2104 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 ANKRD33BA6NCL7 494 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 ANKUB1A6NFN9 424 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 TMEM229AB2RXF0 380 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 NPIPA5E9PKD4 350 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 H0YAE9 185 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 PYCARD-AS1I3L0S3 204 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 NME6O75414 186 aaPredicted RBP7.63□□□□□ -1.19
CCL28-204ENST00000514421 GCM2O75603 506 aaPredicted RBP7.63□□□□□ -1.19
CCL28-204ENST00000514421 REM1O75628 298 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 PPM1BO75688 479 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 PRKD3O94806 890 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 SOX30O94993 753 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 KRT75O95678 551 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 SERPINA1P01009 418 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 C1QCP02747 245 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 ALPLP05186 524 aa7.63□□□□□ -1.19
CCL28-204ENST00000514421 CCL3P10147 92 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms