RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 KRR1Q13601 381 aaKnown RBP13.1□□□□□ -0.31
CLOCK-211ENST00000513440 SUZ12Q15022 739 aaKnown RBP13.1□□□□□ -0.31
CLOCK-211ENST00000513440 SHHQ15465 462 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 MRPL2Q5T653 305 aaKnown RBP13.1□□□□□ -0.31
CLOCK-211ENST00000513440 AGAP6Q5VW22 663 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 FIGLAQ6QHK4 219 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 IL20RBQ6UXL0 311 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 WDR88Q6ZMY6 472 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 OR10H4Q8NGA5 316 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 OSTF1Q92882 214 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 ZNF764Q96H86 408 aaPredicted RBP13.1□□□□□ -0.31
CLOCK-211ENST00000513440 AGAP4Q96P64 663 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 HCAR1Q9BXC0 346 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 TEX12Q9BXU0 123 aa13.1□□□□□ -0.31
CLOCK-211ENST00000513440 LYARQ9NX58 379 aaKnown RBP13.1□□□□□ -0.31
CLOCK-211ENST00000513440 TRAV27A0A087WT01 109 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 SHISA3A0PJX4 238 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 CTSBP07858 339 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 LAMP2P13473 410 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 ENDOUP21128 410 aaKnown RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 TLX1P31314 330 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 C1orf61Q13536 156 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 IL18Q14116 193 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 GDPGP1Q6ZNW5 385 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 ZNF438Q7Z4V0 828 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 RAB43Q86YS6 212 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 OR2T33Q8NG76 320 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 C11orf54Q9H0W9 315 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 RMI1Q9H9A7 625 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 PTGFRNQ9P2B2 879 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 TNFRSF10DQ9UBN6 386 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 ZNF221Q9UK13 617 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 CLEC4AQ9UMR7 237 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 NUP210Q8TEM1 1887 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 SPTBP11277 2137 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 A0A1W2PQF6 199 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 GXYLT2A0PJZ3 443 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 CELA2BP08218 269 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 CLUP10909 449 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 NDUFV2P19404 249 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 PAICSP22234 425 aaKnown RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 TCEA1P23193 301 aaKnown RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 HOXD12P35452 270 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 MRPS15P82914 257 aaKnown RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 PPP2R2DQ66LE6 453 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 ZNF620Q6ZNG0 422 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 CXXC5Q7LFL8 322 aaKnown RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 OR13C2Q8NGS9 318 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 NEIL3Q8TAT5 605 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 FANK1Q8TC84 345 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 FAM3CQ92520 227 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 SDF2Q99470 211 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 OR52D1Q9H346 318 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 ACTR10Q9NZ32 417 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 SDK1Q7Z5N4 2213 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 SGK494L7N484 410 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 SYT5O00445 386 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 PRKNO60260 465 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 CSF3P09919 207 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 CPMP14384 443 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 MAKP20794 623 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 HTR2AP28223 471 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 GABRA3P34903 492 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 ETV6P41212 452 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 RAB25P57735 213 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 VSX2P58304 361 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 EFNB1P98172 346 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 DLX2Q07687 328 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 P2RY14Q15391 338 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 ZAR1Q86SH2 424 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 RERGQ96A58 199 aaPredicted RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 TTYH2Q9BSA4 534 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 IFT27Q9BW83 186 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 HOXD1Q9GZZ0 328 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 OBP2AQ9NY56 170 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 DAPP1Q9UN19 280 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 EXOSC1Q9Y3B2 195 aaKnown RBP13.09□□□□□ -0.31
CLOCK-211ENST00000513440 HEBP2Q9Y5Z4 205 aa13.09□□□□□ -0.31
CLOCK-211ENST00000513440 DUXAA6NLW8 204 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 C12orf71A8MTZ7 269 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 FAM25AB3EWG3 89 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 FAM25CB3EWG5 89 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 FAM25GB3EWG6 89 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 H0YGG7 62 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 SERPINI2O75830 405 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 IL1AP01583 271 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 ARF3P61204 181 aaPredicted RBP13.08□□□□□ -0.32
CLOCK-211ENST00000513440 SCN1BQ07699 218 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 ATAD3CQ5T2N8 411 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 FAM27D1Q5T7N8 215 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 CNIH2Q6PI25 160 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 MBOAT2Q6ZWT7 520 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 KLHL36Q8N4N3 616 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 TMEM99Q8N816 258 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 FGF11Q92914 225 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 BMFQ96LC9 184 aa13.08□□□□□ -0.32
CLOCK-211ENST00000513440 WDR92Q96MX6 357 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms