RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 GPR68Q15743 365 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SYPL1Q16563 259 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 GRAMD1BQ3KR37 738 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 AP1ARQ63HQ0 302 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 TYW3Q6IPR3 259 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC25A25Q6KCM7 469 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 REEP3Q6NUK4 255 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC30A6Q6NXT4 461 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 RPUSD3Q6P087 351 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ERICH5Q6P6B1 374 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 C6orf89Q6UWU4 347 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 GALNTL5Q7Z4T8 443 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ZAR1Q86SH2 424 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 GALNT10Q86SR1 603 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 CALHM3Q86XJ0 350 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 PTOV1Q86YD1 416 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC15A3Q8IY34 581 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ZZZ3Q8IYH5 903 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF295-AS1Q8N0V1 137 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ANKFN1Q8N957 763 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 TEX19Q8NA77 164 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 POGLUT1Q8NBL1 392 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 C11orf65Q8NCR3 313 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 RBM15BQ8NDT2 890 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 HIPK4Q8NE63 616 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 CATSPER1Q8NEC5 780 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 BBS10Q8TAM1 723 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 GRHL3Q8TE85 626 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC38A5Q8WUX1 472 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 PMM1Q92871 262 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 TMEM19Q96HH6 336 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 REXO5Q96IC2 774 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 NODALQ96S42 347 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 FAM173AQ9BQD7 235 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 HES7Q9BYE0 225 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 TBL1XR1Q9BZK7 514 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 HOXD1Q9GZZ0 328 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 C1orf21Q9H246 121 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC38A1Q9H2H9 487 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 RUBCNLQ9H714 662 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 HHATLQ9HCP6 504 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 KLHL1Q9NR64 748 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 UBQLN4Q9NRR5 601 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 FBXO34Q9NWN3 711 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 CMTM6Q9NX76 183 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 KLRF1Q9NZS2 232 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 SUCOQ9UBS9 1254 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 CNOT11Q9UKZ1 510 aaKnown RBP6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ANGPT4Q9Y264 503 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 WIF1Q9Y5W5 379 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 ESPL1Q14674 2120 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 DSPPQ9NZW4 1301 aa6.95□□□□□ -1.3
HMGXB3-204ENST00000513318 A0A0G2JPF8 293 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 HNRNPCL2B2RXH8 293 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 HNRNPCL3B7ZW38 293 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 NPIPB9F8W1W9 429 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 EBAG9O00559 213 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 FADS1O60427 444 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 FCMRO60667 390 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 UGT2B17O75795 530 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 PDE9AO76083 593 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 SNX4O95219 450 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 HNRNPCL4P0DMR1 293 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 ETS2P15036 469 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 CNR1P21554 472 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 RPS4Y1P22090 263 aaKnown RBP6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 ELAVL4P26378 380 aaKnown RBP6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 PCGF2P35227 344 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 CPOXP36551 454 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 PTGDSP41222 190 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 DNASE1L1P49184 302 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 RASSF2P50749 326 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 GZMMP51124 257 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 GPR85P60893 370 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 KCNJ2P63252 427 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC25A3Q00325 362 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 CDK6Q00534 326 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 GABPB1Q06547 395 aaPredicted RBP6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 BNIP1Q12981 228 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 MAPK11Q15759 364 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF141Q15928 474 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 ADRM1Q16186 407 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 VMACQ2NL98 169 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 SPATS1Q496A3 300 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 NADK2Q4G0N4 442 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 C4orf17Q53FE4 359 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 INTS11Q5TA45 600 aaKnown RBP6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 BICRALQ6AI39 1079 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 BNC2Q6ZN30 1099 aaPredicted RBP6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 MISPQ8IVT2 679 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 DEFB107AQ8IZN7 70 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 ARHGAP24Q8N264 748 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF614Q8N883 585 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 OR2T12Q8NG77 320 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 OR2M7Q8NG81 312 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 OR4C3Q8NH37 302 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 FBXO27Q8NI29 283 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 NFKBIDQ8NI38 313 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 MAL2Q969L2 176 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 DTNBP1Q96EV8 351 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms