RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 POLR3HQ9Y535 204 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-216ENST00000512683 SNX8Q9Y5X2 465 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 PTGDR2Q9Y5Y4 395 aa11.29□□□□□ -0.6
VEGFA-216ENST00000512683 ALG1L2C9J202 215 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 NPIPB8E9PQR5 432 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 KLF4O43474 513 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 SS18L1O75177 396 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-216ENST00000512683 JUNP05412 331 aaKnown RBP11.28□□□□□ -0.6
VEGFA-216ENST00000512683 PRPS2P11908 318 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 DDX5P17844 614 aaKnown RBP11.28□□□□□ -0.6
VEGFA-216ENST00000512683 PRPH2P23942 346 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 LOXP28300 417 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-216ENST00000512683 GABRA3P34903 492 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 MAP3K8P41279 467 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 CTBP2P56545 445 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 CLDN20P56880 219 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 VSNL1P62760 191 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 RAC1P63000 192 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 ETFDHQ16134 617 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 IMPG1Q17R60 797 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.28□□□□□ -0.6
VEGFA-216ENST00000512683 CPTPQ5TA50 214 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 ADAM5Q6NVV9 412 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 ZCCHC12Q6PEW1 402 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 PLXDC2Q6UX71 529 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 Q6ZSR9 355 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 MARCH3Q86UD3 253 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 GTPBP8Q8N3Z3 284 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-216ENST00000512683 ZNF611Q8N823 705 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 BANPQ8N9N5 519 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 CCDC63Q8NA47 563 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 OR2T11Q8NH01 316 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 CDC26Q8NHZ8 85 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 TMEM171Q8WVE6 324 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 KLHL4Q9C0H6 718 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 TUBB1Q9H4B7 451 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 GLIPR2Q9H4G4 154 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 MKS1Q9NXB0 559 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 NTMQ9P121 344 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 FN1P02751 2386 aaKnown RBP11.28□□□□□ -0.6
VEGFA-216ENST00000512683 DNHD1Q96M86 4753 aa11.28□□□□□ -0.6
VEGFA-216ENST00000512683 NUP214P35658 2090 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-216ENST00000512683 CSPG4Q6UVK1 2322 aa11.27□□□□□ -0.6
VEGFA-216ENST00000512683 ARID1AO14497 2285 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 UQCRHLA0A096LP55 91 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 TLDC2A0PJX2 215 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 H3BML4 177 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 SEC14L5O43304 696 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 TBX19O60806 448 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 TRIM13O60858 407 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 SEC22BO75396 215 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 CRCPO75575 148 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 UTS2O95399 124 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 CNOT4O95628 575 aaKnown RBP11.27□□□□□ -0.61
VEGFA-216ENST00000512683 ANGPTL1O95841 491 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 PLGP00747 810 aaPredicted RBP11.27□□□□□ -0.61
VEGFA-216ENST00000512683 NUDT17P0C025 328 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 PSMB1P20618 241 aaKnown RBP11.27□□□□□ -0.61
VEGFA-216ENST00000512683 CCKARP32238 428 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 EIF1P41567 113 aaKnown RBP11.27□□□□□ -0.61
VEGFA-216ENST00000512683 PTH2RP49190 550 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 SIRPAP78324 504 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 SH2D4BQ5SQS7 431 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 TMEM107Q6UX40 140 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 STAC2Q6ZMT1 411 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 RNF165Q6ZSG1 346 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 ESPNLQ6ZVH7 1005 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 SSX8Q7RTT4 187 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 TRABD2AQ86V40 505 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 CDRT4Q8N9R6 151 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 OR6Y1Q8NGX8 325 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 SPATA3Q8NHX4 192 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 FAM110BQ8TC76 370 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 FCRL1Q96LA6 429 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 TMEM204Q9BSN7 226 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 NGBQ9NPG2 151 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 TIGARQ9NQ88 270 aa11.27□□□□□ -0.61
VEGFA-216ENST00000512683 C17orf51A8MQB3 221 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 H0YC42 278 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 SLC28A1O00337 649 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 AZIN1O14977 448 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 NDUFB5O43674 189 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 AQP8O94778 261 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 NKX2-2O95096 273 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 SYNGR4O95473 234 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 FESP07332 822 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 ME2P23368 584 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 ADH6P28332 368 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 ALDH3A1P30838 453 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 TPD52P55327 224 aaPredicted RBP11.26□□□□□ -0.61
VEGFA-216ENST00000512683 UGT3A2Q3SY77 523 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 KANK2Q63ZY3 851 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 DNAJC14Q6Y2X3 702 aaPredicted RBP11.26□□□□□ -0.61
VEGFA-216ENST00000512683 ZNF550Q7Z398 422 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 GGNQ86UU5 652 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 CIARTQ8N365 385 aaPredicted RBP11.26□□□□□ -0.61
VEGFA-216ENST00000512683 RIBC1Q8N443 379 aaPredicted RBP11.26□□□□□ -0.61
VEGFA-216ENST00000512683 STEAP2Q8NFT2 490 aa11.26□□□□□ -0.61
VEGFA-216ENST00000512683 OR2V1Q8NHB1 315 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms