RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 NMUR2Q9GZQ4 415 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 TSPAN10Q9H1Z9 355 aaPredicted RBP6.83□□□□□ -1.32
NR1I3-231ENST00000512340 OR51I1Q9H343 314 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 TP63Q9H3D4 680 aaPredicted RBP6.83□□□□□ -1.32
NR1I3-231ENST00000512340 SIRT3Q9NTG7 399 aaPredicted RBP6.83□□□□□ -1.32
NR1I3-231ENST00000512340 DEPPQ9NTK1 212 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 GPATCH2Q9NW75 528 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 GID8Q9NWU2 228 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 TAS2R10Q9NYW0 307 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 COQ3Q9NZJ6 369 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 P2RX2Q9UBL9 471 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 NTNG1Q9Y2I2 539 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 AP3M1Q9Y2T2 418 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 C15orf41Q9Y2V0 281 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 NDUFAF1Q9Y375 327 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 MRPS18CQ9Y3D5 142 aaKnown RBP6.83□□□□□ -1.32
NR1I3-231ENST00000512340 WDR45Q9Y484 360 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 SHANK1Q9Y566 2161 aa6.83□□□□□ -1.32
NR1I3-231ENST00000512340 ZNF407Q9C0G0 2248 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 MYO7BQ6PIF6 2116 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 PRRC2CQ9Y520 2896 aaKnown RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 A0A1B0GTH9 108 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 GXYLT2A0PJZ3 443 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CLEC18AA5D8T8 446 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 GMNCA6NCL1 334 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 AHRRA9YTQ3 701 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 ALG1L2C9J202 215 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CCL21O00585 134 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 NDUFAB1O14561 156 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 EIF4E2O60573 245 aaKnown RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 ZNF354AO60765 605 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SCN2BO60939 215 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 WDR1O75083 606 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 PDE9AO76083 593 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 ANGPTL1O95841 491 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 NUDT14O95848 222 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 NPPAP01160 153 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 IGHG3P01860 377 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 HPNP05981 417 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 STSP08842 583 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 MST1P26927 711 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 DPP4P27487 766 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SOX18P35713 384 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 DCTP40126 519 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 MAP3K8P41279 467 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 EIF1P41567 113 aaKnown RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CA7P43166 264 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CLK1P49759 484 aaKnown RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 TDGF1P3P51864 188 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CRISP3P54108 245 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SUMO3P55854 103 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 WNT3P56703 355 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 FOXO1Q12778 655 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 MRPL49Q13405 166 aaKnown RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CYLC2Q14093 348 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 EIF2S3LQ2VIR3 472 aaKnown RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 GLYR1Q49A26 553 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 LRRC23Q53EV4 343 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CMPK2Q5EBM0 449 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 PDSS1Q5T2R2 415 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SAXO2Q658L1 398 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 TNFAIP8L2Q6P589 184 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CLEC18BQ6UXF7 455 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 TRILQ7L0X0 811 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 EIF3MQ7L2H7 374 aaKnown RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 IFNEQ86WN2 208 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 RNF130Q86XS8 419 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 KRT73Q86Y46 540 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SIAH3Q8IW03 269 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SLC30A8Q8IWU4 369 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CMIPQ8IY22 773 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 ZNF440Q8IYI8 595 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CLEC18CQ8NCF0 446 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SIMC1Q8NDZ2 872 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 CHDHQ8NE62 594 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 TOR1AIP2Q8NFQ8 470 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 OR4N2Q8NGD1 307 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 OR52N2Q8NGI0 321 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 RFWD2Q8NHY2 731 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 NEIL3Q8TAT5 605 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 FAM57AQ8TBR7 257 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 FAM110BQ8TC76 370 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 PHOSPHO1Q8TCT1 267 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 DUSP19Q8WTR2 217 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 LZICQ8WZA0 190 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 RELTQ969Z4 430 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 VPS33AQ96AX1 596 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 GIMAP5Q96F15 307 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 C16orf58Q96GQ5 468 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SFXN2Q96NB2 322 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 GNRHR2Q96P88 292 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 TRNT1Q96Q11 434 aaKnown RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 PHF12Q96QT6 1004 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 PIGQQ9BRB3 760 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SPATA5L1Q9BVQ7 753 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 ZNF703Q9H7S9 590 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 MTHFD2LQ9H903 347 aaPredicted RBP6.82□□□□□ -1.32
NR1I3-231ENST00000512340 TPT1P8Q9HAU6 139 aa6.82□□□□□ -1.32
NR1I3-231ENST00000512340 SERHLQ9NQF3 203 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms