RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 TRIP11Q15643 1979 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 KRBOX1C9JBD0 128 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 DENRO43583 198 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 STK17BO94768 372 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CA3P07451 260 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 TPT1P13693 172 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 HOXC12P31275 282 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 TIA1P31483 386 aaKnown RBP eCLIP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 MASP1P48740 699 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 SMSP52788 366 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CTSCP53634 463 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 PPP2CAP67775 309 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 ZNF585AQ6P3V2 769 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 LMNTD1Q8N9Z9 388 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 RAB39BQ96DA2 213 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 SLC2A11Q9BYW1 496 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 OR11A1Q9GZK7 315 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 IFT22Q9H7X7 185 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 HAO2Q9NYQ3 351 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 HTR1AP08908 422 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CKMT1AP12532 417 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 KDELR2P33947 212 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CX3CR1P49238 355 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CRISP3P54108 245 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 SLC7A9P82251 487 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 PUS10Q3MIT2 529 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 HMGN2P46Q86SG4 172 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CPXM2Q8N436 756 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 LRFN5Q96NI6 719 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 F2RL3Q96RI0 385 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 ACTRT3Q9BYD9 372 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 A0A1B0GVI7 797 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 FEZF1A0PJY2 475 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 ERCC1P07992 297 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 LASP1Q14847 261 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 FXNQ16595 210 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CATSPEREQ5SY80 951 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CES4AQ5XG92 561 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 C22orf42Q6IC83 251 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 ADAM5Q6NVV9 412 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 DBX2Q6ZNG2 339 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 DCP2Q8IU60 420 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 PROKR1Q8TCW9 393 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 GEMIN6Q8WXD5 167 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 MAL2Q969L2 176 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 EGLN2Q96KS0 407 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 OR4K3Q96R72 315 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 GON7Q9BXV9 100 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 HIF1ANQ9NWT6 349 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 NUMBLQ9Y6R0 609 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 SIPA1L1O43166 1804 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 LOC105369274A0A096LPK9 316 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 SEC14L6B5MCN3 397 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 ZNF670-ZNF695F2Z2N8 137 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 MITFO75030 526 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 UBBP0CG47 229 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 UBCP0CG48 685 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CSNK2A2P19784 350 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 IDUAP35475 653 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 RAB28P51157 221 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 RPS26P62854 115 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 GK3PQ14409 553 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 SLC35F3Q8IY50 421 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 OR4N4Q8N0Y3 316 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 MRPL43Q8N983 215 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CNIH3Q8TBE1 160 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 OR1E3Q8WZA6 343 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 USP22Q9UPT9 525 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 PDGFAP04085 211 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 AMY2BP19961 511 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 RSU1Q15404 277 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 ITPRIPL2Q3MIP1 535 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 PHYHD1Q5SRE7 291 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 ALKAL2Q6UX46 152 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 KCTD20Q7Z5Y7 419 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 NDNFQ8TB73 568 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 GPR151Q8TDV0 419 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 GATA6Q92908 595 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 TOX2Q96NM4 488 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 MICU1Q9BPX6 476 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 RAB11FIP5Q9BXF6 653 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 SMIM3Q9BZL3 60 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 MKKSQ9NPJ1 570 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-209ENST00000512055 SMCO4Q9NRQ5 59 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 CLEC4EQ9ULY5 219 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 FOCADQ5VW36 1801 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 ARGFXA6NJG6 315 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 LYRM1O43325 122 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 ABLIM3O94929 683 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 KCNK2O95069 426 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 CNOT4O95628 575 aaKnown RBP10.23□□□□□ -0.77
CPNE4-209ENST00000512055 MT-ND5P03915 603 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 ADRB3P13945 408 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 GGT1P19440 569 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 RAB3AP20336 220 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 KHKP50053 298 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 AKR1C2P52895 323 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 MRPS10P82664 201 aaKnown RBP10.23□□□□□ -0.77
CPNE4-209ENST00000512055 FAM122AQ96E09 287 aa10.23□□□□□ -0.77
CPNE4-209ENST00000512055 TGM7Q96PF1 710 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms