RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ESPNLQ6ZVH7 1005 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 GALNT10Q86SR1 603 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 P2RY8Q86VZ1 359 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 SLC44A2Q8IWA5 706 aaPredicted RBP10.26□□□□□ -0.77
RNF4-216ENST00000511859 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.26□□□□□ -0.77
RNF4-216ENST00000511859 C3orf56Q8N813 242 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 L3MBTL4Q8NA19 623 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 UBLCP1Q8WVY7 318 aaPredicted RBP10.26□□□□□ -0.77
RNF4-216ENST00000511859 HTRA1Q92743 480 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 KLHL29Q96CT2 875 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 REXO5Q96IC2 774 aaKnown RBP10.26□□□□□ -0.77
RNF4-216ENST00000511859 ATOH8Q96SQ7 321 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 TSPYL1Q9H0U9 437 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 GP6Q9HCN6 339 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 TAS2R9Q9NYW1 312 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 MGAT4BQ9UQ53 548 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 OR10H1Q9Y4A9 318 aa10.26□□□□□ -0.77
RNF4-216ENST00000511859 TCRBV9S1A1TA0A576 114 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 CXorf49A8MYA2 514 aaPredicted RBP10.25□□□□□ -0.77
RNF4-216ENST00000511859 VWC2LB2RUY7 222 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 E7EQL1 145 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 UBXN8O00124 270 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 CXCL13O43927 109 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 KERAO60938 352 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 APEHP13798 732 aaKnown RBP10.25□□□□□ -0.77
RNF4-216ENST00000511859 LTB4RQ15722 352 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 CR1LQ2VPA4 569 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 CYP27C1Q4G0S4 372 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 PDLIM3Q53GG5 364 aaPredicted RBP10.25□□□□□ -0.77
RNF4-216ENST00000511859 ZNF628Q5EBL2 1059 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 LGSNQ5TDP6 509 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 NPSR1Q6W5P4 371 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 BHLHA15Q7RTS1 189 aaPredicted RBP10.25□□□□□ -0.77
RNF4-216ENST00000511859 TDRPQ86YL5 185 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 CTAGE3PQ8IX95 158 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 CCDC116Q8IYX3 515 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 BANPQ8N9N5 519 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 OR4N2Q8NGD1 307 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 OR2V1Q8NHB1 315 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 TM4SF18Q96CE8 201 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 CNRIP1Q96F85 164 aaPredicted RBP10.25□□□□□ -0.77
RNF4-216ENST00000511859 PRR14Q9BWN1 585 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 NMRAL1Q9HBL8 299 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 HHATLQ9HCP6 504 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 FAM120CQ9NX05 1096 aaKnown RBP10.25□□□□□ -0.77
RNF4-216ENST00000511859 RNF11Q9Y3C5 154 aa10.25□□□□□ -0.77
RNF4-216ENST00000511859 A0A087WZY1 265 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 IGLV3-32A0A0A0MS00 114 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 SYCE1LA8MT33 242 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 CLDN9O95484 217 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 GSTA2P09210 222 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 PHBP35232 272 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 NR4A2P43354 598 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 PDLIM4P50479 330 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 CARD18P57730 90 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 RAB10P61026 200 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 CHRNB3Q05901 458 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 DUSP2Q05923 314 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 STX5Q13190 355 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 GTF2H2Q13888 395 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 GGTLC2Q14390 218 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 ZKSCAN8Q15776 578 aaPredicted RBP10.24□□□□□ -0.77
RNF4-216ENST00000511859 UAP1Q16222 522 aaPredicted RBP10.24□□□□□ -0.77
RNF4-216ENST00000511859 TIMM23BQ5SRD1 257 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 HBMQ6B0K9 141 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 GTF2H2CQ6P1K8 395 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 TMEM108Q6UXF1 575 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 NUFIP2Q7Z417 695 aaKnown RBP10.24□□□□□ -0.77
RNF4-216ENST00000511859 RELL1Q8IUW5 271 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 SAMD14Q8IZD0 417 aaPredicted RBP10.24□□□□□ -0.77
RNF4-216ENST00000511859 METTL4Q8N3J2 472 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 PPM1NQ8N819 430 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 EIF1ADQ8N9N8 165 aaKnown RBP10.24□□□□□ -0.77
RNF4-216ENST00000511859 AENQ8WTP8 325 aaKnown RBP10.24□□□□□ -0.77
RNF4-216ENST00000511859 OSTF1Q92882 214 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 ZBTB9Q96C00 473 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 GPR22Q99680 433 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 PIMREGQ9BSJ6 248 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 FAIM2Q9BWQ8 316 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 MRPL1Q9BYD6 325 aaKnown RBP10.24□□□□□ -0.77
RNF4-216ENST00000511859 TXLNGYQ9BZA5 131 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 RTN4RQ9BZR6 473 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 IPPKQ9H8X2 491 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 ANKRA2Q9H9E1 313 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 TIGARQ9NQ88 270 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 TXNDC16Q9P2K2 825 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 KLHL13Q9P2N7 655 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 MRTO4Q9UKD2 239 aaKnown RBP10.24□□□□□ -0.77
RNF4-216ENST00000511859 POU2F3Q9UKI9 436 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 RAB21Q9UL25 225 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 PMF1-BGLAPU3KQ54 211 aa10.24□□□□□ -0.77
RNF4-216ENST00000511859 FAM159BA6NKW6 160 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 ZNF814B7Z6K7 855 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 SHISA8B8ZZ34 492 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 POC1B-GALNT4F8VUJ3 575 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 TNFSF11O14788 317 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 RIPK2O43353 540 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 NDUFB5O43674 189 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 PLOD3O60568 738 aa10.23□□□□□ -0.77
RNF4-216ENST00000511859 NTN1O95631 604 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms