RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SLC35E2P0CK97 266 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 ATP6V1C1P21283 382 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 UQCRC2P22695 453 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 HTR2AP28223 471 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 ARFIP1P53367 373 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 METAP1P53582 386 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 RPL8P62917 257 aaKnown RBP2.39□□□□□ -2.03
CHD1-207ENST00000511628 IL9RQ01113 521 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 MICAQ29983 383 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 CCDC57Q2TAC2 916 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 RABGAP1LQ5R372 815 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 LGSNQ5TDP6 509 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 RNLSQ5VYX0 342 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 GCNT7Q6ZNI0 430 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 ANKRD37Q7Z713 158 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 SLC34A3Q8N130 599 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 BPIFB2Q8N4F0 458 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 KLHL30-AS1Q8NEE0 82 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 OR2T33Q8NG76 320 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 OR2T3Q8NH03 318 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 THRSPQ92748 146 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 TRIM44Q96DX7 344 aaPredicted RBP2.39□□□□□ -2.03
CHD1-207ENST00000511628 ZBED6CLQ96FA7 236 aaPredicted RBP2.39□□□□□ -2.03
CHD1-207ENST00000511628 C9orf85Q96MD7 179 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 CCT8L2Q96SF2 557 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 TEX13BQ9BXU2 312 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 ELOVL2Q9NXB9 296 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 PRO0461Q9UI25 63 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 SMC3Q9UQE7 1217 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 RNF6Q9Y252 685 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 KIF3AQ9Y496 699 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 GRIN2DO15399 1336 aa2.39□□□□□ -2.03
CHD1-207ENST00000511628 CARMIL1Q5VZK9 1371 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 IGKV6D-21A0A0A0MT36 114 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 EFCAB7A8K855 629 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 SLC17A2O00624 439 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 CDX4O14627 284 aaPredicted RBP2.38□□□□□ -2.03
CHD1-207ENST00000511628 LCMT2O60294 686 aaKnown RBP2.38□□□□□ -2.03
CHD1-207ENST00000511628 RAMP1O60894 148 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 F10P00742 488 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 CT45A10P0DMU9 189 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 NT5EP21589 574 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 ADSSP30520 456 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 RGS4P49798 205 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 CXCL6P80162 114 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 EWSR1Q01844 656 aaKnown RBP eCLIP2.38□□□□□ -2.03
CHD1-207ENST00000511628 PUDPQ08623 228 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 TGIF1Q15583 401 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 TIGITQ495A1 244 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 ANKDD1AQ495B1 522 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 SLC36A3Q495N2 470 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 ATAD3CQ5T2N8 411 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 MARC1Q5VT66 337 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 UFSP1Q6NVU6 142 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 KIAA1328Q86T90 577 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 HSCBQ8IWL3 235 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 GPR65Q8IYL9 337 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 LRRC43Q8N309 656 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 ARL6IP6Q8N6S5 226 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 Q8N7P7 452 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 OR9A4Q8NGU2 314 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 GTSF1Q8WW33 167 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 VPS39Q96JC1 886 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 AKR1E2Q96JD6 320 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 TTC25Q96NG3 672 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 APOL2Q9BQE5 337 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 RIBC2Q9H4K1 309 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 IKZF5Q9H5V7 419 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 COG4Q9H9E3 785 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 RAB18Q9NP72 206 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 FARSBQ9NSD9 589 aaKnown RBP2.38□□□□□ -2.03
CHD1-207ENST00000511628 CUTCQ9NTM9 273 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 AATFQ9NY61 560 aaKnown RBP eCLIP2.38□□□□□ -2.03
CHD1-207ENST00000511628 ATP10DQ9P241 1426 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 XPO7Q9UIA9 1087 aaKnown RBP2.38□□□□□ -2.03
CHD1-207ENST00000511628 EIF3LQ9Y262 564 aaKnown RBP2.38□□□□□ -2.03
CHD1-207ENST00000511628 GSTK1Q9Y2Q3 226 aa2.38□□□□□ -2.03
CHD1-207ENST00000511628 USP6P35125 1406 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 POGZQ7Z3K3 1410 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 PPIAL4CA0A0B4J2A2 164 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 A8MX80 341 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 PPIAL4DF5H284 164 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 CPLX1O14810 134 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 NOL4O94818 638 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 GJB5O95377 273 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 ANP32DO95626 131 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 IGHDP01880 384 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 THY1P04216 161 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 GIG44P09565 113 aaPredicted RBP2.37□□□□□ -2.03
CHD1-207ENST00000511628 KRTAP1-4P0C5Y4 121 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 PPIAL4GP0DN37 164 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 PRG2P13727 222 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 RPA2P15927 270 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 TPSB2P20231 275 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 FASP25445 335 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 PSMA5P28066 241 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 CDH5P33151 784 aaPredicted RBP2.37□□□□□ -2.03
CHD1-207ENST00000511628 IFNAR2P48551 515 aa2.37□□□□□ -2.03
CHD1-207ENST00000511628 OSTNP61366 133 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms