RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 RCOR2Q8IZ40 523 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 TMEM86AQ8N2M4 240 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 AMER3Q8N944 861 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 MSANTD4Q8NCY6 345 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 EXOC6Q8TAG9 804 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 HCAR2Q8TDS4 363 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 DDI1Q8WTU0 396 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 PHF10Q8WUB8 498 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 CT55Q8WUE5 264 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 PIK3R3Q92569 461 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 RIT1Q92963 219 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 TSACCQ96A04 125 aaPredicted RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 PYCR2Q96C36 320 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 MAGED4Q96JG8 741 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 BMFQ96LC9 184 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 CCDC114Q96M63 670 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 ZNF560Q96MR9 790 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 TSPAN18Q96SJ8 248 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 PKMYT1Q99640 499 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 DDX50Q9BQ39 737 aaKnown RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 MLPHQ9BV36 600 aaPredicted RBP3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 CCSER1Q9C0I3 900 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 GFRA4Q9GZZ7 299 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 APMAPQ9HDC9 416 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 YAE1D1Q9NRH1 226 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 MAN2C1Q9NTJ4 1040 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 PLCXD1Q9NUJ7 323 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 ABCB8Q9NUT2 735 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 SEC14L3Q9UDX4 400 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 GGA2Q9UJY4 613 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 WDR37Q9Y2I8 494 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 SNX5Q9Y5X3 404 aa3.02□□□□□ -1.93
TOPBP1-208ENST00000511439 ANK3Q12955 4377 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 RYR1P21817 5038 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 AKAP6Q13023 2319 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 IGKV3D-15A0A087WSY6 115 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 IGKV3D-20A0A0C4DH25 116 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 A0A1B0GU03 582 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 A0A1B0GVY2 172 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 TTC26A0AVF1 554 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 SNURFLB1AK76 121 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 C17orf105B2RV13 164 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 F8VP50 259 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 F8VVB4 439 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 F8VWA3 439 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 K7ERI5 159 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 CCL24O00175 119 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 PIRO00625 290 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 CD5LO43866 347 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 SELENOFO60613 162 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 KIAA0754O94854 1291 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 SLU7O95391 586 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 SLC2A2P11168 524 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 F3P13726 295 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 ATP6V1B1P15313 513 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 UGT1A4P22310 534 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 DUTP33316 252 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 ATP5C1P36542 298 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 CETN2P41208 172 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 DNA2P51530 1060 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 OR1D5P58170 312 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 CNTN1Q12860 1018 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 PTK6Q13882 451 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 TRIM29Q14134 588 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 ZBTB6Q15916 424 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 BTNL8Q6UX41 500 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 LEKR1Q6ZMV7 388 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 MACC1Q6ZN28 852 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 CPEB2Q7Z5Q1 589 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 PHLDB2Q86SQ0 1253 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 ZNF589Q86UQ0 364 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 STK40Q8N2I9 435 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 ZNF557Q8N988 423 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 NHLRC2Q8NBF2 726 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 CLEC1AQ8NC01 280 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 SLC37A3Q8NCC5 494 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 NCOA7Q8NI08 942 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 GDAP1Q8TB36 358 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 SLC26A7Q8TE54 656 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 GATAD1Q8WUU5 269 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 METTL21AQ8WXB1 218 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 FRAT1Q92837 279 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 MYLPFQ96A32 169 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 CNDP1Q96KN2 507 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 ART5Q96L15 291 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 IFT74Q96LB3 600 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 AK8Q96MA6 479 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 JAKMIP1Q96N16 626 aaKnown RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 LPAR4Q99677 370 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 RIMS4Q9H426 269 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 KCNJ16Q9NPI9 418 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 LHX9Q9NQ69 397 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 PHPT1Q9NRX4 125 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 LNPEPQ9UIQ6 1025 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 PRDM4Q9UKN5 801 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 ITGA11Q9UKX5 1188 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 CLEC4EQ9ULY5 219 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 ERVW-1Q9UQF0 538 aa3.01□□□□□ -1.93
TOPBP1-208ENST00000511439 CNTRLQ7Z7A1 2325 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms