RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 FAM110BQ8TC76 370 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 ACMSDQ8TDX5 336 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 ACTRT2Q8TDY3 377 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 ZBTB8AQ96BR9 441 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 PLPPR2Q96GM1 343 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 METTL2AQ96IZ6 378 aaKnown RBP20.42■□□□□ 0.86
SMAD5-207ENST00000511116 NPAS1Q99742 590 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 MID1IP1Q9NPA3 183 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 MCTS1Q9ULC4 181 aaKnown RBP20.42■□□□□ 0.86
SMAD5-207ENST00000511116 CLEC4AQ9UMR7 237 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 VDAC3Q9Y277 283 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 GPR52Q9Y2T5 361 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 CCL27Q9Y4X3 112 aa20.42■□□□□ 0.86
SMAD5-207ENST00000511116 POLR3HQ9Y535 204 aaPredicted RBP20.42■□□□□ 0.86
SMAD5-207ENST00000511116 CHD3Q12873 2000 aaKnown RBP20.41■□□□□ 0.86
SMAD5-207ENST00000511116 ABCA1O95477 2261 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 NPIPB8E9PQR5 432 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 H3BQF6 201 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 OXSR1O95747 527 aaPredicted RBP20.41■□□□□ 0.86
SMAD5-207ENST00000511116 GSTA1P08263 222 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 CTBP2P56545 445 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 SLC29A2Q14542 456 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 KIAA0040Q15053 153 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 WHAMMP3Q1A5X7 153 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 PLPPR5Q32ZL2 321 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 NOXRED1Q6NXP6 359 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 GALNT10Q86SR1 603 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 NOA1Q8NC60 698 aaKnown RBP20.41■□□□□ 0.86
SMAD5-207ENST00000511116 OR4C3Q8NH37 302 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 CDC26Q8NHZ8 85 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 IFT81Q8WYA0 676 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 PIK3R3Q92569 461 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 ANP32BQ92688 251 aaKnown RBP20.41■□□□□ 0.86
SMAD5-207ENST00000511116 PRRG4Q9BZD6 226 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 ACTR6Q9GZN1 396 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 FANCFQ9NPI8 374 aa20.41■□□□□ 0.86
SMAD5-207ENST00000511116 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.41■□□□□ 0.86
SMAD5-207ENST00000511116 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 OVOL3O00110 214 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 CRLF1O75462 422 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 PLGP00747 810 aaPredicted RBP20.4■□□□□ 0.86
SMAD5-207ENST00000511116 PRPS2P11908 318 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 PRPH2P23942 346 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 AGTR1P30556 359 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 RFX3P48380 749 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 ATP5J2P56134 94 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 NAA20P61599 178 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 ZNF844Q08AG5 666 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 CPTPQ5TA50 214 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 ESPNLQ6ZVH7 1005 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 ZNF551Q7Z340 670 aaPredicted RBP20.4■□□□□ 0.86
SMAD5-207ENST00000511116 OR2V1Q8NHB1 315 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 MZB1Q8WU39 189 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 GIMAP5Q96F15 307 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 EGLN2Q96KS0 407 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 EMCNQ9ULC0 261 aa20.4■□□□□ 0.86
SMAD5-207ENST00000511116 A0A0J9YW62 118 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 A0A1W2PRB8 838 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 G3V2L1 256 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 CXCL13O43927 109 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 TBX19O60806 448 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 LCN1P31025 176 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 FRKP42685 505 aaPredicted RBP20.39■□□□□ 0.85
SMAD5-207ENST00000511116 TNK1Q13470 666 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 IMPG1Q17R60 797 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 VPS26BQ4G0F5 336 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 GLE1Q53GS7 698 aaKnown RBP20.39■□□□□ 0.85
SMAD5-207ENST00000511116 EXOSC6Q5RKV6 272 aaKnown RBP20.39■□□□□ 0.85
SMAD5-207ENST00000511116 EXOC3L1Q86VI1 746 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 CDRT4Q8N9R6 151 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 POC1BQ8TC44 478 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 GPR151Q8TDV0 419 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 CCDC126Q96EE4 140 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 MED17Q9NVC6 651 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 CADP27708 2225 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 FREM1Q5H8C1 2179 aa20.39■□□□□ 0.85
SMAD5-207ENST00000511116 NDUFB5O43674 189 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 GMFGO60234 142 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 GCM2O75603 506 aaPredicted RBP20.38■□□□□ 0.85
SMAD5-207ENST00000511116 SYNGR4O95473 234 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 THBS1P07996 1170 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 SLC18A2Q05940 514 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 MFSD12Q6NUT3 480 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 FRMD7Q6ZUT3 714 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 STK32CQ86UX6 486 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 WFDC8Q8IUA0 241 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 LILRB1Q8NHL6 650 aaPredicted RBP20.38■□□□□ 0.85
SMAD5-207ENST00000511116 SLC9A6Q92581 669 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 FCRL1Q96LA6 429 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 RNF145Q96MT1 663 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 TNFRSF12AQ9NP84 129 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 EQTNQ9NQ60 294 aa20.38■□□□□ 0.85
SMAD5-207ENST00000511116 A0A1W2PQD3 144 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 TNFSF11O14788 317 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 PDPK1O15530 556 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 TUBBP07437 444 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 ACP2P11117 423 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 ETFDHQ16134 617 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 ZYG11AQ6WRX3 759 aa20.37■□□□□ 0.85
SMAD5-207ENST00000511116 ZAR1Q86SH2 424 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms