RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 ARL13AQ5H913 290 aaPredicted RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 PDSS1Q5T2R2 415 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 MED27Q6P2C8 311 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 LEG1Q6P5S2 330 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 NPSR1Q6W5P4 371 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 RBMS3Q6XE24 437 aaKnown RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 ADAMTSL2Q86TH1 951 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 GTPBP8Q8N3Z3 284 aaPredicted RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 SIGLECL1Q8N7X8 197 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 OR7G3Q8NG95 312 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 CLDND2Q8NHS1 167 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 NANPQ8TBE9 248 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 RNF217Q8TC41 542 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 DUSP19Q8WTR2 217 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 C1orf54Q8WWF1 131 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 TAF15Q92804 592 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNF8-207ENST00000509995 CPNE4Q96A23 557 aaPredicted RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 C1orf147Q96MC9 270 aaPredicted RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 CITED1Q99966 193 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 RBM4BQ9BQ04 359 aaKnown RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 TMPRSS13Q9BYE2 586 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 SRXN1Q9BYN0 137 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 DDX31Q9H8H2 851 aaKnown RBP9.39□□□□□ -0.91
SNF8-207ENST00000509995 NTMQ9P121 344 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 MMP24Q9Y5R2 645 aa9.39□□□□□ -0.91
SNF8-207ENST00000509995 IGLV3-32A0A0A0MS00 114 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 B9A039 149 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 TAPBPO15533 448 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 NDUFB5O43674 189 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 GMFGO60234 142 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 PRKD3O94806 890 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 ERCC1P07992 297 aaPredicted RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 RNASE1P07998 156 aaKnown RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 GAAP10253 952 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 ME2P23368 584 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 FPR2P25090 351 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 PSMA4P25789 261 aaKnown RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 PSPHP78330 225 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 POU4F1Q01851 419 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 DDX39BQ13838 428 aaKnown RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 TSNQ15631 228 aaKnown RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 ZNHIT3Q15649 155 aaPredicted RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 TUSC1Q2TAM9 212 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 TRMT12Q53H54 448 aaKnown RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 BRICD5Q6PL45 260 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 C4orf22Q6V702 233 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 C17orf107Q6ZR85 190 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 FCRLAQ7L513 359 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 DOK3Q7L591 496 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 REC114Q7Z4M0 266 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 SPATA19Q7Z5L4 167 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 UBL4BQ8N7F7 174 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 HUS1BQ8NHY5 278 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 NEU4Q8WWR8 484 aaPredicted RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 KLHL15Q96M94 604 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 NPAS1Q99742 590 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 C1QTNF6Q9BXI9 259 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 RSPO3Q9BXY4 272 aaPredicted RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 PLK3Q9H4B4 646 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 NARFLQ9H6Q4 476 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 ANKZF1Q9H8Y5 726 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 CNOT10Q9H9A5 744 aaKnown RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 BCO1Q9HAY6 547 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 FLRT3Q9NZU0 649 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 ZDHHC2Q9UIJ5 367 aa9.38□□□□□ -0.91
SNF8-207ENST00000509995 FBXO9Q9UK97 447 aaPredicted RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 PACSIN2Q9UNF0 486 aaPredicted RBP9.38□□□□□ -0.91
SNF8-207ENST00000509995 KERAO60938 352 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 KNG1P01042 644 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 AHSGP02765 367 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 GBAP04062 536 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 SAGP10523 405 aaPredicted RBP9.37□□□□□ -0.91
SNF8-207ENST00000509995 PCSK2P16519 638 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 GGT5P36269 586 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 HSPA7P48741 367 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 MRPS35P82673 323 aaKnown RBP9.37□□□□□ -0.91
SNF8-207ENST00000509995 ZP4Q12836 540 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 TGFBIQ15582 683 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 EFNB3Q15768 340 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 KPRPQ5T749 579 aaPredicted RBP9.37□□□□□ -0.91
SNF8-207ENST00000509995 NUDT13Q86X67 352 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 TCAIMQ8N3R3 496 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 LRRC57Q8N9N7 239 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 OR4N2Q8NGD1 307 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNF8-207ENST00000509995 UBASH3BQ8TF42 649 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 DVL3Q92997 716 aaPredicted RBP9.37□□□□□ -0.91
SNF8-207ENST00000509995 SLC25A28Q96A46 364 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 ESAMQ96AP7 390 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 CALR3Q96L12 384 aaKnown RBP9.37□□□□□ -0.91
SNF8-207ENST00000509995 RNF145Q96MT1 663 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 VSTM2LQ96N03 204 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 RACGAP1Q9H0H5 632 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 CXorf36Q9H7Y0 433 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 SLC52A3Q9NQ40 469 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 TIGARQ9NQ88 270 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 CA10Q9NS85 328 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 LMBRD1Q9NUN5 540 aa9.37□□□□□ -0.91
SNF8-207ENST00000509995 FAM120CQ9NX05 1096 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms