RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ARHGEF9O43307 516 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 TBX19O60806 448 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 KCNK2O95069 426 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 SYNGR4O95473 234 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 OXSR1O95747 527 aaPredicted RBP13.83□□□□□ -0.2
TPM3-219ENST00000509409 CD8BP10966 210 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 ACP2P11117 423 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 FCGR2AP12318 317 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 TBXA2RP21731 343 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 UGT2B10P36537 528 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 ASMTP46597 345 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 CTBP2P56545 445 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 PCLAFQ15004 111 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 CPTPQ5TA50 214 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 ANKRD34AQ69YU3 496 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 FAM214BQ7L5A3 538 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 ZNF550Q7Z398 422 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 P3H2Q8IVL5 708 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 HOMEZQ8IX15 550 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 COX18Q8N8Q8 333 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 SLC16A11Q8NCK7 471 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 OTUB1Q96FW1 271 aaPredicted RBP13.83□□□□□ -0.2
TPM3-219ENST00000509409 SH3YL1Q96HL8 342 aaPredicted RBP13.83□□□□□ -0.2
TPM3-219ENST00000509409 FCRL1Q96LA6 429 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 MS4A4EQ96PG1 132 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 UBTD1Q9HAC8 227 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 EML4Q9HC35 981 aaKnown RBP13.83□□□□□ -0.2
TPM3-219ENST00000509409 ACSS1Q9NUB1 689 aaPredicted RBP13.83□□□□□ -0.2
TPM3-219ENST00000509409 CLEC4AQ9UMR7 237 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 EMC9Q9Y3B6 208 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 TRAF6Q9Y4K3 522 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 DNAJC15Q9Y5T4 150 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 VPS13CQ709C8 3753 aa13.83□□□□□ -0.2
TPM3-219ENST00000509409 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 SCDO00767 359 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 LSM1O15116 133 aaKnown RBP13.82□□□□□ -0.2
TPM3-219ENST00000509409 SMPD2O60906 423 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 AQP8O94778 261 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 CGAP01215 116 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 BCKDHAP12694 445 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 CRYGSP22914 178 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 ADSLP30566 484 aaPredicted RBP13.82□□□□□ -0.2
TPM3-219ENST00000509409 ALDH3A1P30838 453 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 HOXC12P31275 282 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 MAP3K8P41279 467 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 SERPINB4P48594 390 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 PCYT1AP49585 367 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 PRIM2P49643 509 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 ZNF41P51814 821 aaPredicted RBP13.82□□□□□ -0.2
TPM3-219ENST00000509409 OCRLQ01968 901 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 DUSP5Q16690 384 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 PDSS1Q5T2R2 415 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 SHEQ5VZ18 495 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 KANK2Q63ZY3 851 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 ZCCHC12Q6PEW1 402 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 FAM110BQ8TC76 370 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 TWIST2Q8WVJ9 160 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 MTERF3Q96E29 417 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 GIMAP5Q96F15 307 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 ZNF764Q96H86 408 aaPredicted RBP13.82□□□□□ -0.2
TPM3-219ENST00000509409 DLL4Q9NR61 685 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 UBQLN4Q9NRR5 601 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 FBXO34Q9NWN3 711 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 PAQR5Q9NXK6 330 aaPredicted RBP13.82□□□□□ -0.2
TPM3-219ENST00000509409 NTMQ9P121 344 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 MCTS1Q9ULC4 181 aaKnown RBP13.82□□□□□ -0.2
TPM3-219ENST00000509409 SNX8Q9Y5X2 465 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 NF1P21359 2839 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 MED12LQ86YW9 2145 aa13.82□□□□□ -0.2
TPM3-219ENST00000509409 HRNRQ86YZ3 2850 aaPredicted RBP13.81□□□□□ -0.2
TPM3-219ENST00000509409 A0A1W2PRB8 838 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 DEFB108AA8MXU0 73 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 TMEM114B3SHH9 223 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 PIP5K1BO14986 540 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 CXCL13O43927 109 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 NPHS1O60500 1241 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 PEX11AO75192 247 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 CHRNGP07510 517 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 NGFRP08138 427 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 FGF4P08620 206 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 ZNF17P17021 662 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 ME2P23368 584 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 MAPK1P28482 360 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 LCN1P31025 176 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 HPCAL1P37235 193 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 FRKP42685 505 aaPredicted RBP13.81□□□□□ -0.2
TPM3-219ENST00000509409 SLC6A8P48029 635 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 RAC1P63000 192 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 POU6F2P78424 691 aaPredicted RBP13.81□□□□□ -0.2
TPM3-219ENST00000509409 PDE7AQ13946 482 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 ACKR1Q16570 336 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.81□□□□□ -0.2
TPM3-219ENST00000509409 TMEM44Q2T9K0 475 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 KRTAP21-3Q3LHN1 58 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 ARL13AQ5H913 290 aaPredicted RBP13.81□□□□□ -0.2
TPM3-219ENST00000509409 CCNJQ5T5M9 372 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 MFSD12Q6NUT3 480 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 LRIG3Q6UXM1 1119 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 RNF165Q6ZSG1 346 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 ZAR1Q86SH2 424 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms