RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 BRINP1O60477 761 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 DBIP07108 87 aaKnown RBP13.79□□□□□ -0.2
PHF3-209ENST00000509330 GIMD1P0DJR0 217 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 GADD45AP24522 165 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 MAGEA8P43361 318 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 OMPP47874 163 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 PCYT1AP49585 367 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 ZNF91Q05481 1191 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 PRR22Q8IZ63 422 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 DNASE2BQ8WZ79 361 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 NRSN2Q9GZP1 204 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 TBC1D23Q9NUY8 699 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 NLGN3Q9NZ94 848 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 CDHR4A6H8M9 788 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 C17orf105B2RV13 164 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 M0R3G1 203 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 TGFBR2P37173 567 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 CLK1P49759 484 aaKnown RBP13.79□□□□□ -0.2
PHF3-209ENST00000509330 SH3BGRP55822 239 aaPredicted RBP13.79□□□□□ -0.2
PHF3-209ENST00000509330 ARMCX4Q5H9R4 360 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 C12orf73Q69YU5 71 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 FCRLBQ6BAA4 426 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 OGFOD3Q6PK18 319 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 TMPRSS9Q7Z410 1059 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 RANBP3LQ86VV4 465 aaPredicted RBP13.79□□□□□ -0.2
PHF3-209ENST00000509330 PIGKQ92643 395 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 OR51E2Q9H255 320 aa13.79□□□□□ -0.2
PHF3-209ENST00000509330 FAM183AA6NL82 134 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 DUX1O43812 170 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 GRM7Q14831 915 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 SLC35F1Q5T1Q4 408 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 LYSMD4Q5XG99 296 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 SLCO6A1Q86UG4 719 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 OR6C4Q8NGE1 309 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 ACOT11Q8WXI4 607 aaPredicted RBP13.78□□□□□ -0.2
PHF3-209ENST00000509330 CCDC74AQ96AQ1 378 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 NACC2Q96BF6 587 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 DNAJA3Q96EY1 480 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 GAL3ST4Q96RP7 486 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 ELF4Q99607 663 aaPredicted RBP13.78□□□□□ -0.2
PHF3-209ENST00000509330 MESP1Q9BRJ9 268 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 OR10A5Q9H207 317 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 PLCXD1Q9NUJ7 323 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 COQ9O75208 318 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 GABARAPO95166 117 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 CFIP05156 583 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 SOX3P41225 446 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 SKP1P63208 163 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 HSD11B2P80365 405 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 SHBQ15464 509 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 ZNF595Q8IYB9 648 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 OR8J1Q8NGP2 316 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 GNPDA2Q8TDQ7 276 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 CNDP2Q96KP4 475 aaKnown RBP13.78□□□□□ -0.2
PHF3-209ENST00000509330 SAMD8Q96LT4 415 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 VSTM2LQ96N03 204 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 NECAB3Q96P71 396 aaPredicted RBP13.78□□□□□ -0.2
PHF3-209ENST00000509330 STACQ99469 402 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 CHCHD6Q9BRQ6 235 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 GPN2Q9H9Y4 310 aaPredicted RBP13.78□□□□□ -0.2
PHF3-209ENST00000509330 TIMMDC1Q9NPL8 285 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 FLRT3Q9NZU0 649 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 CSNK1G3Q9Y6M4 447 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 FREM2Q5SZK8 3169 aa13.78□□□□□ -0.2
PHF3-209ENST00000509330 ZNF749O43361 778 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 NKX2-2O95096 273 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 IFI30P13284 250 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 EFNA3P52797 238 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 TBCEQ15813 527 aaPredicted RBP13.77□□□□□ -0.2
PHF3-209ENST00000509330 LPAL2Q16609 132 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 TSTQ16762 297 aaKnown RBP13.77□□□□□ -0.2
PHF3-209ENST00000509330 EIPR1Q53HC9 387 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 SLC27A4Q6P1M0 643 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 LAPTM4BQ86VI4 370 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 OR4Q3Q8NH05 313 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 OR4C3Q8NH37 302 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 ENKD1Q9H0I2 346 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 FKBP14Q9NWM8 211 aa13.77□□□□□ -0.2
PHF3-209ENST00000509330 EFCAB9A8MZ26 197 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 WWP2O00308 870 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 LRRTM2O43300 516 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 AIREO43918 545 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 CNOT3O75175 753 aaKnown RBP13.77□□□□□ -0.21
PHF3-209ENST00000509330 DBTP11182 482 aaKnown RBP13.77□□□□□ -0.21
PHF3-209ENST00000509330 SMSP52788 366 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 CSNK2BP67870 215 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 TSPAN31Q12999 210 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 SYT14P1Q58G82 188 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 TCTE1Q5JU00 501 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 GUSBP11Q6P575 273 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 GPR135Q8IZ08 494 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 DPYSL5Q9BPU6 564 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 PRSS27Q9BQR3 290 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 DUSP15Q9H1R2 295 aaPredicted RBP13.77□□□□□ -0.21
PHF3-209ENST00000509330 CELSR3Q9NYQ7 3312 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 C17orf51A8MQB3 221 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 PATE3B3GLJ2 98 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 NUDT21O43809 227 aaKnown RBP13.77□□□□□ -0.21
PHF3-209ENST00000509330 SLITRK5O94991 958 aa13.77□□□□□ -0.21
PHF3-209ENST00000509330 NADKO95544 446 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms